Dr. Steffen Prohaska - Staff
Zuse Institute Berlin (ZIB)
Numerical Mathematics
Department Visualization and Data Analysis
Takustr. 7
D-14195 Berlin-Dahlem
Germany
Email: prohaska
zib.de
Phone: +49 30 84185-337
Fax: +49 30 84185-107
Room: 4005
Numerical Mathematics
Department Visualization and Data Analysis
Takustr. 7
D-14195 Berlin-Dahlem
Germany
Email: prohaska
zib.dePhone: +49 30 84185-337
Fax: +49 30 84185-107
Room: 4005
URL: Personal Homepage
Publications
2013 |
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| Ulrike Homberg, Daniel Baum, Alexander Wiebel, Steffen Prohaska, Hans-Christian Hege | Definition, Extraction, and Validation of Pore Structures in Porous Material | Topological Methods in Data Analysis and Visualization III, 2013 | BibTex | RIS |
2012 |
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| Britta Weber, Garrett Greenan, Steffen Prohaska, Daniel Baum, Hans-Christian Hege, Thomas Müller-Reichert, Anthony A. Hyman, Jean-Marc Verbavatz | Automated tracing of microtubules in electron tomograms of plastic embedded samples of Caenorhabditis elegans embryos | Journal of Structural Biology, Vol. 178, No. 2, pp. 129 - 138, 2012 | DOI BibTex | RIS |
| Ulrike Homberg, Daniel Baum, Steffen Prohaska, Ute Kalbe, Karl Josef Witt | Automatic Extraction and Analysis of Realistic Pore Structures from µCT Data for Pore Space Characterization of Graded Soil | Proceedings of the 6th International Conference on Scour and Erosion (ICSE-6) (accepted for publication), pp. 66-73, 2012 | BibTex | RIS |
| Marco Klindt, Steffen Prohaska, Daniel Baum, Hans-Christian Hege | Conveying Archaeological Contexts to Museum Visitors: Case Study Pergamon Exhibition | VAST12: The 13th International Symposium on Virtual Reality, Archaeology and Intelligent Cultural Heritage - Short Papers, David Arnold, Jaime Kaminski, Franco Niccolucci, Andre Stork (Eds.), pp. 25-28, Eurographics Association: Brighton, UK, 2012 | DOI BibTex | RIS |
| Marco Klindt, Daniel Baum, Steffen Prohaska, Hans-Christian Hege | iCon.text – a customizable iPad app for kiosk applications in museum exhibitions | EVA 2012 Berlin, nov, pp. 150-155, Gesellschaft zur Förderung angewandter Informatik e.V.: Volmerstraße 3, 12489 Berlin, 2012 | PDF (Preprint) BibTex | RIS |
2011 |
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| Alexander Rigort, David Günther, Reiner Hegerl, Daniel Baum, Britta Weber, Steffen Prohaska, Ohad Medalia, Wolfgang Baumeister, Hans-Christian Hege | Automated segmentation of electron tomograms for a quantitative description of actin filament networks | Journal of Structural Biology, Vol. 177, pp. 135-144, 2011 | DOI BibTex | RIS |
| Karsten Ehrig, Jürgen Goebbels, Dietmar Meinel, Olaf Paetsch, Steffen Prohaska, Valentin Zobel | Comparison of Crack Detection Methods for Analyzing Damage Processes in Concrete with Computed Tomography | International Symposium on Digital Industrial Radiology and Computed Tomography, 2011 | BibTex | RIS |
| Ulrike Homberg, Daniel Baum, Steffen Prohaska | Describing and Analyzing the Dual Structures of Porous Media | Proc. 3D-Microstructure Meeting, F. Mücklich, P. Slussallek, K. Schladitz (Eds.), pp. 24-25, 2011 | BibTex | RIS |
| David Günther, Jan Reininghaus, Steffen Prohaska, Tino Weinkauf, Hans-Christian Hege | Efficient Computation of a Hierarchy of Discrete 3D Gradient Vector Fields | Topological Methods in Data Analysis and Visualization II, Ronny Peikert, Helwig Hauser, Hamish Carr (Eds.), pp. 15-29, Springer, 2011 | DOI BibTex | RIS |
| Britta Weber, Marit Möller, Jean-Marc Verbavatz, Daniel Baum, Hans-Christian Hege, Steffen Prohaska | Fast Tracing of Microtubule Centerlines in Electron Tomograms | BioVis 2011 Abstracts, 1st IEEE Symposium on Biological Data Visualization, Oct., 2011 | PDF BibTex | RIS |
| David Kleinfeld, Arjun Bharioke, Pablo Blinder, David D. Bock, Kevin L. Briggman, Dmitri B. Chklovskii, Winfried Denk, Moritz Helmstaedter, John P. Kaufhold, Wei-Chung Allen Lee, Hanno S. Meyer, Kristina D. Micheva, Marcel Oberlaender, Steffen Prohaska, R. Clay Reid, Stephen J. Smith, Shinya Takemura, Philbert S. Tsai, Bert Sakmann | Large-scale automated histology in the pursuit of connectomes | Journal of Neuroscience, Vol. 31, No. 45, pp. 16125-16138, 2011 | DOI BibTex | RIS |
| Malte Clasen, Philip Paar, Steffen Prohaska | Level of Detail for Trees Using Clustered Ellipsoids | ZIB-Report 11-41 | PDF BibTex | RIS |
2010 |
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| Norbert Lindow, Daniel Baum, Steffen Prohaska, Hans-Christian Hege | Accelerated Visualization of Dynamic Molecular Surfaces | Comput. Graph. Forum, Vol. 29, pp. 943-952, 2010 | DOI BibTex | RIS |
| Anja Kuß, Maria Gensel, Björn Meyer, Vincent J. Dercksen, Steffen Prohaska | Effective Techniques to Visualize Filament-Surface Relationships | Comput. Graph. Forum, Vol. 29, pp. 1003-1012, 2010 | PDF BibTex | RIS |
| Richard Binner, Ulrike Homberg, Steffen Prohaska, Ute Kalbe, Karl Josef Witt | Identification of Descriptive Parameters of the Soil Pore Structure using Experiments and CT Data | Proceedings of the 5th International Conference on Scour and Erosion (ICSE-5), pp. 397-407, American Society of Civil Engineers (ASCE), 2010 | BibTex | RIS |
| Malte Clasen, Steffen Prohaska | Image-Error-Based Level of Detail for Landscape Visualization | Proc. VMV 2010: Vision, Modeling and Visualization, pp. 267-274, 2010 | BibTex | RIS |
| Alexander Ziegler, Malte Ogurreck, Thomas Steinke, Felix Beckmann, Steffen Prohaska, Andreas Ziegler | Opportunities and challenges for digital morphology | Biology Direct, Vol. 5, No. 1, pp. 45, 2010 | PDF DOI BibTex | RIS |
| Jan Reininghaus, David Günther, Ingrid Hotz, Steffen Prohaska, Hans-Christian Hege | TADD: A Computational Framework for Data Analysis Using Discrete Morse Theory | Mathematical Software - ICMS 2010, Lecture Notes in Computer Science, Joris van der Hoeven, Michael Joswig Komei Fukuda, Nobuki Takayama (Eds.), Vol. 6327, pp. 198-208, Springer, 2010 | DOI BibTex | RIS |
2009 |
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| Vincent Jasper Dercksen, Britta Weber, David Günther, Marcel Oberlaender, Steffen Prohaska, Hans-Christian Hege | Automatic alignment of stacks of filament data | Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 971-974, IEEE press: Boston, USA, 2009 | PDF BibTex | RIS |
| Olivier Semar, Richard Binner, Ulrike Homberg, Ute Kalbe, Tobias Mehlhorn, Steffen Prohaska, Volker Slowik, Karl Josef Witt | Conditions for Suffosive Erosion Phemomena in Soils – Concept and Approach | Workshop Internal Erosion, Schriftenreihe Geotechnik, K. J. Witt (Ed.), Vol. 21, pp. 29-35, 2009 | PDF BibTex | RIS |
| Ulrike Homberg, Richard Binner, Steffen Prohaska, Vincent J. Dercksen, Anja Kuß, Ute Kalbe | Determining Geometric Grain Structure from X-Ray Micro-Tomograms of Gradated Soil | Workshop Internal Erosion, Schriftenreihe Geotechnik, K. J. Witt (Ed.), Vol. 21, pp. 37-52, 2009 | PDF BibTex | RIS |
| Olufemi Rosanwo, Christoph Petz, Steffen Prohaska, Ingrid Hotz, Hans-Christian Hege | Dual Streamline Seeding | Proceedings of the IEEE Pacific Visualization Symposium, Beijing, China, Peter Eades, Thomas Ertl, Han-Wei Shen (Eds.), pp. 9-16, 2009 | PDF (Preprint) BibTex | RIS |
| Christoph Petz, Jens Kasten, Steffen Prohaska, Hans-Christian Hege | Hierarchical Vortex Regions in Swirling Flow | Computer Graphics Forum, Vol. 28, No. 3, pp. 863-870, 2009 | PDF BibTex | RIS |
| Tobias Mehlhorn, Steffen Prohaska, Ulrike Homberg, Volker Slowik | Modelling and Analysis of Particle and Pore Structures in Soils | Workshop Internal Erosion, Schriftenreihe Geotechnik, K. J. Witt (Ed.), Vol. 21, pp. 53-60, 2009 | PDF BibTex | RIS |
| Anja Kuß, Steffen Prohaska, Jürgen Rybak | Using Ontologies for the Visualization of Hierarchical Neuroanatomical Structures | Frontiers in Neuroinformatics. Conference Abstract: 2nd INCF Congress of Neuroinformatics, 2009 | DOI BibTex | RIS |
2008 |
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| Olufemi Rosanwo, Christoph Petz, Steffen Prohaska, Ingrid Hotz, Hans-Christian Hege | Dual Streamline Seeding - Method and Implementation | Appeared in: Proceedings of the IEEE Pacific Visualization Symposium (P. Eades, T. Ertl und H.-W. Shen, Hg.), 2009, S. 9–16., | PDF (Preprint) BibTex | RIS |
| Jan Sahner, Britta Weber, Hans Lamecker, Steffen Prohaska | Extraction of feature Lines on surface meshes based on discrete Morse theory | Proc. Eurographics / IEEE VGTC Symposium on Visualization (EuroVis '08), Eindhoven, Netherlands, May 26 - 28, pp. 735-742, 2008 | PDF DOI BibTex | RIS |
| Christoph Petz, Steffen Prohaska, Leonid Goubergrits, Ulrich Kertzscher, Hans-Christian Hege | Near-Wall Flow Visualization in Flattened Surface Neighborhoods | Proc. Simulation and Visualization 2008, Magdeburg, Germany, February, pp. 93-105, 2008 | PDF BibTex | RIS |
| Anja Kuß, Steffen Prohaska, Björn Meyer, Jürgen Rybak, Hans-Christian Hege | Ontology-Based Visualization of Hierarchical Neuroanatomical Structures | Proceedings of the Eurographics Workshop on Visual Computing for Biomedicine VCBM 2008, October, C.P. Botha, G. Kindlmann, W.J. Niessen, B. Preim (Eds.), pp. 177-184, 2008 | PDF BibTex | RIS |
| Steffen Prohaska | Skeleton-based visualization of massive voxel objects with network-like architecture | Doctoral thesis, 2008 | PDF BibTex | RIS |
2006 |
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| Francis Cassot, Frederic Lauwers, Céline Fouard, Steffen Prohaska, Valerie Lauwer-Cances | A novel three-dimensional computer assisted method for a quantitative study of microvascular networks of the human cerebral cortex | Microcirculation, Vol. 13, pp. 15-32, 2006 | PDF PMID BibTex | RIS |
| Céline Fouard, Grégoire Malandain, Steffen Prohaska, Malte Westerhoff | Blockwise processing applied to brain micro-vascular network study | IEEE Transactions on Medical Imaging, Vol. 25, No. 10, pp. 1319-1328, 2006 | PDF DOIPMID BibTex | RIS |
| Andrei Hutanu, Gabrielle Allen, Stephen D. Beck, Petr Holub, Hartmut Kaiser, Archit Kulshrestha, Milos Liska, Jon MacLaren, Ludek Matyska, Ravi Paruchuri, Steffen Prohaska, Edward Seidel, Brygg Ullmer, Shalini Venkataraman | Distributed and collaborative visualization of large data sets using high-speed networks | Future Generation Comp. Syst, Vol. 22(8), pp. 1004-1010, 2006 | DOI BibTex | RIS |
| Steffen Prohaska | Interaktive Visualisierung und Datenanalyse: Herausforderungen durch wachsende Datenmengen | Kartographische Schriften: Aktuelle Entwicklungen in Geoinformation und Visualisierung (GEOVIS 2006), Vol. 10, pp. 103-110, 2006 | PDF BibTex | RIS |
2005 |
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| Vincent Jasper Dercksen, Steffen Prohaska, Hans-Christian Hege | Fast cross-sectional display of large data sets | IAPR Conference on Machine Vision Applications, Tsukuba, Japan, May, pp. 336-339, 2005 | PDF BibTex | RIS |
| Alexei Zaikin, Peter Saparin, Jürgen Kurths, Steffen Prohaska, Wolfgang Gowin | Modeling resorption in 2D-CT and 3D $\mu$-CT bone images | Int. J. of Bif. and Chaos, Vol. 15(9), pp. 2995-3009, 2005 | PDF BibTex | RIS |
| Peter Saparin, Jesper Skovhus Thomsen, Steffen Prohaska, Alexei Zaikin, Jürgen Kurths, Hans-Christian Hege, Wolfgang Gowin | Quantification of spatial structure of human proximal tibial bone biopsies using 3D measures of complexity | Acta Astronautica, Vol. 56, No. 9-12, pp. 820-830, 2005 | PDF DOIPMID BibTex | RIS |
| Steffen Prohaska, Andrei Hutanu | Remote data access for interactive visualization | 13th Annual Mardi Gras Conference: Frontiers of Grid Applications and Technologies, pp. 17-22, 2005 | PDF BibTex | RIS |
| Jasper Skovhus Thomsen, Andreas Laib, Bruno Koller, Steffen Prohaska, L. Mosekilde, Wolfgang Gowin | Stereological measures of trabecular bone structure: Comparison of 3D micro computed tomography with 2D histological sections in human proximal tibial bone biopsies | Journal of Microscopy, Vol. 218, pp. 171-179, 2005 | PDF PMID BibTex | RIS |
| Hans-Christian Hege, Tino Weinkauf, Steffen Prohaska, Andrei Hutanu | Towards distributed visualization and analysis of large flow data | JSME International Journal, Series B, Vol. 48 (2), pp. 241-246, 2005 | BibTex | RIS |
| Ralf Kähler, Steffen Prohaska, Andrei Hutanu, Hans-Christian Hege | Visualization of time-dependent remote adaptive mesh refinement data | Proc. IEEE Visualization 2005, Minneapolis, USA, October, pp. 175-182, 2005 | PDF DOI BibTex | RIS |
2004 |
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| Steffen Prohaska, Matthew Dreher, Mark W. Dewhirst, Ashutosh Chilkoti, Axel R. Pries | 3-D reconstruction of tumor vascular networks | J. Vas. Res., Vol. 41, pp. 463, 2004 | PDF BibTex | RIS |
| Hans-Christian Hege, Tino Weinkauf, Steffen Prohaska, Andrei Hutanu | Distributed visualization and analysis of fluid dynamics data | Proc. Fourth International Symposium on Advanced Fluid Information and Transdisciplinary Fluid Integration, Sendai, Japan, November, pp. 145-150, 2004 | PDF BibTex | RIS |
| Steffen Prohaska, Andrei Hutanu, Ralf Kähler, Hans-Christian Hege | Interactive exploration of large remote micro-CT scans | Proc. IEEE Visualization 2004, Austin, Texas, H. Rushmeier, J. J. van Wijk, G. Turk (Eds.), pp. 345-352, 2004 | PDF DOI BibTex | RIS |
| Céline Fouard, Grégoire Malandain, Steffen Prohaska, Malte Westerhoff, Francis Cassot, Christophe Mazel, Didier Asselot, Jean-Pierre Marc-Vergnes | Skeletonization by blocks for large 3D datasets: Application to brain microcirculation | IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington, Virginia, pp. 89-92, 2004 | PDF DOI BibTex | RIS |
| Céline Fouard, Grégoire Malandain, Steffen Prohaska, Malte Westerhoff, Francis Cassot, Christophe Mazel, Didier Asselot, Jean-Pierre Marc-Vergnes | Squelettisation par blocs pour des grands volumes de données 3D: Application à la microcirculation cérébrale | Reconnaissance des Formes et Intelligence Artificielle (RFIA 2004), Toulouse, France, 2004 | PDF BibTex | RIS |
2003 |
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| Alexei Zaikin, Peter Saparin, Steffen Prohaska, Jürgen Kurths, Wolfgang Gowin | 2D and 3D bone modelling for analysis of changes in the bone architecture and for evaluation of structural measures. | 2nd European Congress 'Achievements in Space Medicine into Health Care Practice and Industry', Berlin-Adlershof, March 27-29, 2003 | PDF BibTex | RIS |
| Steffen Prohaska, Hans-Christian Hege, Michael Giehl, Wolfgang Gowin | A Virtual Laboratory for Assessment of Bone Biopsies | 14th IAA Humans in Space Symposium, Banff, Alberta, Canada, May 18-24, pp. 7, 2003 | BibTex | RIS |
| Wolfgang Gowin, Peter Saparin, Steffen Prohaska, Hans-Christian Hege, Stefan Belle, Dieter Felsenberg | Architectural Reasons for the Femoral Neck Fracture Location | 2nd European Congress 'Achievements in Space Medicine into Health Care Practice and Industry', Berlin-Adlershof, March 27-29, 2003 | BibTex | RIS |
| Jesper Skovhus Thomsen, Bruno Koller, Andreas Laib, Steffen Prohaska, Michael Giehl, Wolfgang Gowin | Comparison between Static Histomorphometric Measures Conducted by Traditionally 2D Histomorphometry and 3D $\mu$-CT in Human Tibial Biopsies | 2nd European Congress 'Achievements in Space Medicine into Health Care Practice and Industry', Berlin-Adlershof, March 27-29, 2003 | BibTex | RIS |
| Steffen Prohaska, Hans-Christian Hege, Michael Giehl, Wolfgang Gowin | Interactive Visualization to Support Quantification of Bone Biopsies | 2nd European Congress 'Achievements in Space Medicine into Health Care Practice and Industry', Berlin-Adlershof, March 27-29, 2003 | BibTex | RIS |
| Peter Saparin, Wolfgang Gowin, Alexei Zaikin, Jesper Skovhus Thomsen, Steffen Prohaska, Hans-Christian Hege, Jürgen Kurths | Quantification of Changes in Spatial Structure of Human Bone Biopsies Using 3D Measures of Complexity | 14th IAA Humans in Space Symposium, Banff, Alberta, Canada, May 18-24, 2003 | BibTex | RIS |
| Peter Saparin, Wolfgang Gowin, Alexei Zaikin, Steffen Prohaska | Quantification of changes in human bone structure at different skeletal locations using measures of complexity | 2nd European Congress 'Achievements in Space Medicine into Health Care Practice and Industry', Berlin-Adlershof, March 27-29, 2003 | BibTex | RIS |
2002 |
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| Alexei Zaikin, Peter Saparin, Steffen Prohaska, Jürgen Kurths, Wolfgang Gowin | Bone Modeling and Structural Measures of Complexity | Journal of Gravitational Physiology, Vol. 9, pp. 175-176, 2002 | PDF DOIPMID BibTex | RIS |
| Steffen Prohaska, Hans-Christian Hege | Fast Visualization of Plane-Like Structures in Voxel Data | Proceedings of IEEE Visualization 2002, October/November, Robert J. Moorhead, Markus Gross, Kenneth I. Joy (Eds.), pp. 29-36, IEEE Computer Society Press: Boston MA, USA, 2002 | PDF DOI BibTex | RIS |
| Wolfgang Gowin, Peter Saparin, Steffen Prohaska, Hans-Christian Hege, Dieter Felsenberg | Femoral Neck Fractures: Reasons for the Most Common Location of Fractures | Acta Orthop. Scand. (Suppl. 304), Vol. 73, pp. 26, 2002 | BibTex | RIS |
| Hans-Christian Hege, Hartmut Schirmacher, Malte Westerhoff, Hans Lamecker, Steffen Prohaska, Stefan Zachow | From Image Data to Three-Dimensional Models - Case Studies on the Impact of 3D Patient Models | Proceedings of the Japan Korea Computer Graphics Conference 2002, Kanazawa City, Ishikawa, Japan, 2002 | PDF BibTex | RIS |
| Wolfgang Gowin, Peter Saparin, Dieter Felsenberg, Jürgen Kurths, Alexei Zaikin, Steffen Prohaska, Hans-Christian Hege | Regional Structural Skeletal Discordance Assessed by Measures of Complexity | 2002 | PDF BibTex | RIS |
| Steffen Prohaska, Hans-Christian Hege, Michael Giehl, Wolfgang Gowin | Visual Analysis of Trabecular Bone Structure | Journal of Gravitational Physiology, Vol. 9 (1), pp. 171-172, 2002 | PDF PMID BibTex | RIS |
2001 |
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| Cornelia Kober, Robert Sader, Hans-Florian Zeilhofer, Steffen Prohaska, Stefan Zachow, Peter Deuflhard | Anisotrope Materialmodellierung für den menschlichen Unterkiefer | Erschienen in: Die Methode der Finiten Elemente in der Biomechanik, Biomedizin und angrenzenden Gebieten, Workshop '01, Univ. Ulm, 23./24.7.2001, | PDF (Preprint) BibTex | RIS |