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Publications

2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002

2013

Robert Döbbelin, Thorsten Schütt, Alexander Reinefeld Building Large Compressed PDBs for the Sliding Tile Puzzle ZIB-Report 13-21 PDF


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F. Orejas, A. Boronat, U. Golas, N. Mylonakis Checking Bisimilarity for Attributed Graph Transformation Foundations of Software Science and Computation Structures. Proceedings of FOSSACS 2013, LNCS, March, E. Pfenning (Ed.), Vol. 7794, pp. 113-128, Springer, 2013 DOI
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Kathrin Sobe Consistency and Fault Tolerance of Distributed Storage Systems Doctoral thesis, 2013
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Michael Berlin Consistent and Partition-Tolerant File Replication in the Cloud File System Xtreem FS Praxis der Informationsverarbeitung und Kommunikation, Vol. 36, No. 1, p. 39, 2013 DOI
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Harry Enke, Norman Fiedler, Thomas Fischer, Timo Gnadt, Erik Ketzan, Jens Ludwig, Torsten Rathmann, Gabriel Stöckle, Florian Schintke Leitfaden zum Forschungsdaten-Management: Handreichungen aus dem WissGrid-Projekt Leitfaden zum Forschungsdaten-Management: Handreichungen aus dem WissGrid-Projekt, Harry Enke, Jens Ludwig (Eds.), Verlag Werner Hülsbusch, Glückstadt, 2013
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Jan Stender Snapshots in Large-Scale Distributed File Systems Doctoral thesis, 2013
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F. Schintke XtreemFS & Scalaris Science & Technology, No. 6, pp. 54-55, Pan European Networks, 2013
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2012

S. Kindermann, F. Schintke, B. Fritzsch A Collaborative Data Management Infrastructure for Climate Data Analysis Geophysical Research Abstracts, Vol. 14, EGU2012-10569, 2012 PDF

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Richard Grunzke, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Sandra Gesing, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Martin Kruse, Ralph Müller-Pfefferkorn, Patrick Schäfer, Bernd Schuller, Thomas Steinke, Andreas Zink A Data Driven Science Gateway for Computational Workflows Proceedings of the UNICORE Summit, Dresden, Germany, May, 2012
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Ulrike Golas A General Attribution Concept for Models in M- adhesive Transformation Systems: Long Version ZIB-Report 12-22 PDF


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U. Golas A General Attribution Concept for Models in M-Adhesive Transformation Systems Proceedings of ICGT 2012, LNCS, September, H. Ehrig, G. Engels, H.-J. Kreowski, G. Rozenberg (Eds.), Vol. 7562, pp. 187-202, Springer, 2012 DOI
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T. Soboll, U. Golas A Local-Global Model for Multiagent Systems - Sheaves on the Category MAS Proceedings of ICAART 2012, J. Filipe, A. Fred (Eds.), Vol. 2, pp. 331-334, SciTePress, 2012
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Sebastian Dreßler, Thomas Steinke A Novel Hybrid Approach to Automatically Determine Kernel Interface Data Volumes ZIB-Report 12-23 PDF


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Sandra Gesing, Sonja Herres-Pawlis, Georg Birkenheuer, André Brinkmann, Richard Grunzke, Peter Kacsuk, Oliver Kohlbacher, Miklos Kozlovs zky, Jens Krüger, Ralph Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke A Science Gateway Getting Ready for Serving the International Molecular Simulation Community Proceedings of Science, Vol. PoS(EGICF12-EMITC2)050, 2012 PDF

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Sandra Gesing, Richard Grunzke, Jens Krüger, Georg Birkenheuer, Martin Wewior, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Sonja Herres-Pawlis, Sebastian Breuers, Akos Balasko, Miklos Kozlovszky, Anna Szikszay Fabri, Lars Packschies, Peter Kacsuk, Dirk Blunk, Thomas Steinke, André Brinkmann, Gregor Fels, Ralph Müller-Pfefferkorn, René Jäkel, Oliver Kohlbacher A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics Journal of Grid Computing, 2012
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Björn Kolbeck A fault-tolerant and scalable protocol for replication in distributed file systems Doctoral thesis, 2012
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Robert Döbbelin, Thorsten Schütt, Alexander Reinefeld An Analysis of SMP Memory Allocators: MapReduce on Large Shared-Memory Systems Proceedings of the 41st International Conference on Parallel Processing Workshops (Fifth International Workshop on Parallel Programming Models and Systems Software for High-End Computing (P2S2)), September, pp. 48 - 54, IEEE Computer Society, 2012 DOI
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K. Peter, P. Sobe Application of Regenerating Codes for Fault Tolerance in Distributed Storage Systems Network Computing and Applications (NCA), 2012 11th IEEE International Symposium on, August, pp. 67-70, 2012 DOI
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U. Golas, L. Lambers, H. Ehrig, F. Orejas Attributed Graph Transformation with Inheritance: Efficient Conflict Detection and Local Confluence Analysis Using Abstract Critical Pairs Theoretical Computer Science, Vol. 424, pp. 46-68, 2012 DOI
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Kathrin Peter, Alexander Reinefeld Consistency and fault tolerance for erasure-coded distributed storage systems Proceedings of the fifth international workshop on Data-Intensive Distributed Computing Date, DIDC '12, Delft, The Netherlands, pp. 23-32, ACM: New York, NY, USA, 2012 DOI
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Mikael Högqvist Consistent Key-Based Routing in Decentralized and Reconfigurable Data Services Doctoral thesis, 2012
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Sebastian Dreßler, Thomas Steinke Energy consumption of CUDA kernels with varying thread topology Computer Science - Research and Development, pp. 1-9, Springer Berlin / Heidelberg, 2012 DOI
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Harry Enke, Adrian Partl, Alexander Reinefeld, Florian Schintke Handling Big Data in Astronomy and Astrophysics: Rich Structured Queries on Replicated Cloud Data with XtreemFS Datenbank-Spektrum, Vol. 12, No. 3, pp. 173-181, Springer-Verlag, 2012 DOI
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H. Ehrig, U. Golas, A. Habel, L. Lambers, F. Orejas M-Adhesive Transformation Systems with Nested Application Conditions. Part 2: Embedding, Critical Pairs and Local Confluence Fundamenta Informaticae, Vol. 118, No. 1-2, pp. 35-63, 2012 DOI
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Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke, Klaus Warzecha, Martin Wewior MoSGrid: Efficient Data Management and a Standardized Data Exchange Format for Molecular Simulations in a Grid Environment Journal of Cheminformatics, Vol. 4, No. Suppl 1, p. P21, 2012 DOI
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F. Wende, F. Cordes, T. Steinke On Improving the Performance of Multi-threaded CUDA Applications with Concurrent Kernel Execution by Kernel Reordering Application Accelerators in High Performance Computing (SAAHPC), 2012 Symposium on, July, pp. 74-83, 2012 DOI
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R. Heckel, H. Ehrig, U. Golas, F. Hermann Parallelism and Concurrency of Stochastic Graph Transformations Proceedings of ICGT 2012, LNCS, September, H. Ehrig, G. Engels, H.-J. Kreowski, G. Rozenberg (Eds.), Vol. 7562, pp. 96-110, Springer, 2012 DOI
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U. Golas, T. Soboll (Eds.) Proceedings of ACCAT 2012 Electronic Proceedings in Theoretical Computer Science 93, 2012 DOI
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T. Flik, A. Reinefeld Rechnerorganisation Hütte -- Das Ingenieurwissen, Horst Czichos, Manfred Hennecke (Eds.), pp. J6-J124, Springer-Verlag Berlin, 2012
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Patrick Schäfer, Mikael Högqvist SFA: a symbolic fourier approximation and index for similarity search in high dimensional datasets Proceedings of the 15th International Conference on Extending Database Technology, EDBT '12, Berlin, Germany, March, pp. 516-527, ACM: New York, NY, USA, 2012 DOI
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Sandra Gesing, Sonja Herres-Pawlis, Georg Birkenheuer, Andre Brinkmann, Richard Grunzke, Peter Kacsuk, Oliver Kohlbacher, Miklos Kozlovszky, Jens Krüger, Ralf Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke The MoSGrid Community -- From National to International Scale EGI Community Forum 2012, 2012
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U. Golas, L. Lambers, H. Ehrig, H. Giese Towards Bridging the Gap between Formal Foundations and Current Practice for Triple Graph Grammars - Flexible Relations between Source and Target Elements Proceedings of ICGT 2012, LNCS, September, H. Ehrig, G. Engels, H.-J. Kreowski, G. Rozenberg (Eds.), Vol. 7562, pp. 141-155, Springer, 2012 DOI
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2011

Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, Andre Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Ulrich Lang, Lars Packschies, Ralf Müller-Pfefferkorn, Patrick Schäfer, Hans-Günther Schmalz, Thomas Steinke, Klaus Warzecha, Martin Wewior A Molecular Simulation Grid as new tool for Computational Chemistry, Biology and Material Science Journal of Cheminformatics 2011, Vol. 3, No. Suppl 1, 2011 DOI
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Sandra Gesing, Peter Kacsuk, Miklos Kozlovszky, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, Andre Brinkmann, Gregor Fels, Richard Grunzke, Sonja Herres-Pawlis, Jens Krüger, Lars Packschies, Ralf Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke, Anna Szikszay Fabri, Klaus Warzecha, Martin Wewior, Oliver Kohlbacher A Science Gateway for Molecular Simulations EGI (European Grid Infrastructure) User Forum 2011, Book of Abstracts, pp. 94-95, 2011
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U. Golas, E. Biermann, H. Ehrig, C. Ermel A Visual Interpreter Semantics for Statecharts Based on Amalgamated Graph Transformation ECEASST, Vol. 39, pp. 1-24, 2011
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Harry Enke, Matthias Steinmetz, Hans-Martin Adorf, Alexander Beck-Ratzka, Frank Breitling, Thomas Brüsemeister, Arthur Carlson, Torsten Ensslin, Mikael Högqvist, Iliya Nickelt, Thomas Radke, Alexander Reinefeld, Angelika Reiser, Tobias Scholl, Rainer Spurzem, Jürgen Steinacker, Wolfgang Voges, Joachim Wambsganß, Steve White AstroGrid-D: Grid technology for astronomical science New Astronomy, Vol. 16, No. 2, pp. 79-93, 2011 DOI
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Björn Kolbeck, Mikael Högqvist, Jan Stender, Felix Hupfeld Flease - Lease Coordination Without a Lock Server Parallel and Distributed Processing Symposium, International, Vol. 0, pp. 978-988, IEEE Computer Society: Los Alamitos, CA, USA, 2011 DOI
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U. Golas, H. Ehrig, F. Hermann Formal Specification of Model Transformations by Triple Graph Grammars with Application Conditions ECEASST, Vol. 39, pp. 1-26, 2011
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U. Golas, K. Hoffmann, H. Ehrig, A. Rein, J. Padberg Functorial Analysis of Algebraic Higher-Order Net Systems with Applications to Mobile Ad-Hoc Networks ECEASST, Vol. 40, pp. 1-20, 2011
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Sandra Gesing, Richard Grunzke, Akos Balasko, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Gregor Fels, Sonja Herres-Pawlis, Peter Kacsuk, Miklos Kozlovszky, Jens Krüger, Lars Packschies, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Thomas Steinke, Anna Szikszay Fabri, Martin Wewior, Ralph Müller-Pfefferkorn, Oliver Kohlbacher Granular Security for a Science Gateway in Structural Bioinformatics Proc. IWSG-Life 2011, 2011
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F. Chabarek, U. Golas Interaktive Vervollständigung der Szenariobasierten Spezifikation eines Parkassistenzsystems Proceedings of GI-ASE 2011, GI-Edition LNI, H.-U. Heiß, P. Pepper, H. Schlingloff, J. Schneider (Eds.), 2011
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Stefan Plantikow, Maik Jorra Latency-Optimal Walks in Replicated and Partitioned Graphs Database Systems for Adanced Applications, Jianliang Xu, Ge Yu, Shuigeng Zhou, Rainer Unland (Eds.), Vol. 6637, pp. 14-27, Springer Berlin / Heidelberg, 2011 DOI
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Thorsten Schütt, Alexander Reinefeld, Robert Maier MR-search: massively parallel heuristic search Concurrency and Computation: Practice and Experience, John Wiley & Sons, Ltd, 2011 DOI
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Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, Andre Brinkmann, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Ulrich Lang, Lars Packschies, Ralf Müller-Pfefferkorn, Patrick Schäfer, Johannes Schuster, Thomas Steinke, Klaus Warzecha, Martin Wewior MoSGrid: Progress of Workflow driven Chemical Simulations Proc. of Grid Workflow Workshop 2011, Cologne, Germany, March, Vol. 826, CEUR Workshop Proceedings, 2011 PDF

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Kathrin Peter Reliability Study of Coding Schemes for Wide-Area Distributed Storage Systems PDP 2011: The 19th Euromicro International Conference on Parallel, Distributed and Network-Based Computing, February, Euromicro, 2011
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Frank Dickmann, Jürgen Falkner, Wilfried Gunia, Jochen Hampe, Michael Hausmann, Alexander Herrmann, Nick Kepper, Tobias A. Knoch, Svenja Lauterbach, Jörg Lippert, Kathrin Peter, Eberhard Schmitt, Ulrich Schwardmann, Juri Solodenko, Dietmar Sommerfeld, Thomas Steinke, Anette Weisbecker, Ulrich Sax Solutions for biomedical grid computing -- Case studies from the D-Grid project Services@MediGRID Journal of Computational Science, Vol. -, No. 0, 2011 DOI
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Nico Kruber, Mikael Högqvist, Thorsten Schütt The Benefits of Estimated Global Information in DHT Load Balancing Cluster Computing and the Grid, IEEE International Symposium on, Vol. 0, pp. 382-391, IEEE Computer Society: Los Alamitos, CA, USA, 2011 DOI
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2010

Jan Stender, Björn Kolbeck, Mikael Högqvist, Felix Hupfeld BabuDB: Fast and Efficient File System Metadata Storage Storage Network Architecture and Parallel I/Os, IEEE International Workshop on, pp. 51-58, IEEE Computer Society: Los Alamitos, CA, USA, 2010 DOI
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Joos-Hendrik Böse, Artur Andrzejak, Mikael Högqvist Beyond online aggregation: Parallel and incremental data mining with online Map-Reduce Proceedings of the 2010 Workshop on Massive Data Analytics on the Cloud, MDAC '10, Raleigh, North Carolina, April, pp. 3:1-3:6, ACM: New York, NY, USA, 2010 DOI
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T. Schmidt-Goenner, A. Guerler, B. Kolbeck, E. W. Knapp Circular permuted proteins in the universe of protein folds Proteins, Vol. 78, pp. 1618-1630, 2010
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Artur Andrzejak, Derrick Kondo, Sangho Yi Decision Model for Cloud Computing under SLA Constraints Modeling, Analysis & Simulation of Computer and Telecommunication Systems (MASCOTS), 2010 IEEE International Symposium on, August, pp. 257-266, IEEE, 2010 DOI
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Thomas Steinke, Kathrin Peter, Sebastian Borchert Efficiency Considerations of Cauchy Reed-Solomon Implementations on Accelerator and Multi-Core Platforms Symposium on Application Accelerators in High Performance Computing (SAAHPC), Knoxville, USA, July, 2010 PDF

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Florian Schintke, Alexander Reinefeld, Seif Haridi, Thorsten Schütt Enhanced Paxos Commit for Transactions on DHTs CCGRID, May, pp. 448-454, IEEE, 2010 PDF (Preprint)

DOI
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Artur Andrzejak, Derrick Kondo, David P. Anderson Exploiting non-dedicated resources for cloud computing 12th IEEE/IFIP Network Operations & Management Symposium (NOMS 2010), Osaka, Japan, April, pp. 341-348, 2010 DOI
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Björn Kolbeck, Mikael Högqvist, Jan Stender, Felix Hupfeld Fault-Tolerant and Decentralized Lease Coordination in Distributed Systems ZIB-Report 10-02 PDF


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J. Stender, M. Högqvist, B. Kolbeck Loosely Time-Synchronized Snapshots in Object-Based File Systems Proceedings of the 29th IEEE International Performance, Computing, and Communications Conference, December, IEEE Computer Society, 2010
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Florian Schintke Management verteilter Daten in Grid- und Peer-to-Peer-Systemen Dissertation, 2010
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G. Birkenheuer, D. Blunk, S. Breuers, A. Brinkmann, I. d. Santos Vieira, G. Fels, S. Gesing, R. Grunzke, S. Herres-Pawlis, O. Kohlbacher, N. Kruber, J. Krüger, U. Lang, L. Packschies, R. Müller-Pfefferkorn, P. Schäfer, H.-G. Schmalz, Th. Steinke, K.-D. Warzecha, M. Wewior MoSGrid -- A Molecular Simulation Grid as a new tool in Computational Chemistry, Biology and Material Science 6. German Conference on Chemoinformatics, 2010
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J. Krüger, G. Birkenheuer, D. Blunk, S. Breuers, A. Brinkmann, G. Fels, S. Gesing, R. Grunzke, S. Herres-Pawlis, O. Kohlbacher, N. Kruber, U. Lang, L. Packschies, R. Müller-Pfefferkorn, P. Schäfer, H.-G. Schmalz, Th. Steinke, K.-D. Warzecha, M. Wewior Molecular Simulation Grid 6. German Conference on Chemoinformatics, 2010
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Alexander Ziegler, Malte Ogurreck, Thomas Steinke, Felix Beckmann, Steffen Prohaska, Andreas Ziegler Opportunities and challenges for digital morphology Biology Direct, Vol. 5, No. 1, p. 45, 2010 DOI
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P. May, A. Kreuchwig, T. Steinke, I. Koch PTGL: a database for secondary structure-based protein topologies Nucleic Acids Res., Vol. 38, pp. D326-330, 2010
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Dagmar Krefting, Ralf Lützkendorf, Kathrin Peter, Johannes Bernarding Performance Analysis of Diffusion Tensor Imaging in an Academic Production Grid CCGRID, May, pp. 751-756, IEEE Computer Socienty, 2010 DOI
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U. Schwiegelshohn, R. Badia, M. Bubak, M. Danelutto, S. Dustdar, F. Gagliardi, A. Geiger, L. Hluchy, D. Kranzlmüller, T. Priol E. Laure, A. Reinefeld, M. Resch, A. Reuter, O. Rienhoff, T. Rüter, P. Sloot, D. Talia, K. Ullmann, R. Yahyapour, G. von Voigt Perspectives on Grid Computing Future Generation Computer Systems, Vol. 26, No. 8, pp. 1104-1115, 2010 DOI
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Thorsten Schütt Range queries in distributed hash tables Dissertation, 2010
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Sangho Yi, D. Kondo, A. Andrzejak Reducing Costs of Spot Instances via Checkpointing in the Amazon Elastic Compute Cloud Cloud Computing (CLOUD), 2010 IEEE 3rd International Conference on, July, pp. 236 -243, 2010 DOI
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Joanna Geibig, Dirk Bradler Self-organized aggregation in irregular wireless networks Proceedings of the 3rd IFIP Wireless Days Conference 2010, October, pp. 1-7, IEEE Computer Society, 2010 DOI
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P. van Roy, S. Haridi, A. Reinefeld, J.B. Stefani The Clouds of Revolution Public Service Review 19, pp. 449, 2010
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Alexander Reinefeld, Thorsten Schütt, Robert Maier Very large pattern databases for heuristic search HPDC, June, Salim Hariri, Kate Keahey (Eds.), pp. 803-809, ACM, 2010 DOI
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2009

B. Kolbeck A Protocol for Efficient and Fault-tolerant File Replication over Wide-Area Networks TCPP Ph.D. Forum, Int. Parallel and Distributed Processing Symposium, Vol. 0, p. 19, IEEE Computer Society: Los Alamitos, CA, USA, 2009 DOI
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A. Reinefeld, F. Schintke, T. Schütt, S. Haridi A Scalable, Transactional Data Store for Future Internet Services Towards the Future Internet - A European Research Perspective, G. Tselentis, J. Domingue, A. Galis, A. Gavras, D. Hausheer, S. Krco, V. Lotz, T. Zahariadis (Eds.), pp. 148-159, IOS Press, 2009 DOI
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M. Högqvist Architecture and Self-Tuning of a DISC-system TCPP Ph.D. Forum, Int. Parallel and Distributed Processing Symposium, p. 16, IEEE Computer Society: Los Alamitos, CA, USA, 2009 DOI
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Georg Birkenheuer, Arthur Carlson, Alexander Fölling, Mikael Högqvist, Andreas Hoheisel, Alexander Papaspyrou, Klaus Rieger, Bernhard Schott, Wolfgang Ziegler Connecting Communities on the Meta-Scheduling Level: The DGSI Approach! Proceedings of the Cracow Grid Workshop (CGW), pp. 96-103, 2009
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Frank Hertel, Dagmar Krefting, Ralf Lützkendorf, Fred Viezens, Andreas Thiel, Kathrin Peter, Johannes Bernarding Diffusions-Tensor-Imaging als Gridanwendung - Perfomanzsteigerung und standortunabhängiger Zugang zu leistungsfähigen Ressourcen GI Jahrestagung'09, pp. 1233-1240, 2009
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K. Peter Distributed Erasure Tolerant Storage with Solid State Technology TCPP Ph.D. Forum, Int. Parallel and Distributed Processing Symposium, p. 23, IEEE Computer Society: Los Alamitos, CA, USA, 2009 DOI
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Jan Stender Efficient Management of Consistent Backups in a Distributed File System COMPSAC (1), July, pp. 656-659, IEEE Computer Society, 2009 DOI
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Raphael André Bauer, Kristian Rother, Peter Moor, Knut Reinert, Thomas Steinke, Janusz M. Bujnicki, Robert Preissner Fast Structural Alignment of Biomolecules Using a Hash Table, N-Grams and String Descriptors Algorithms, Vol. 2, No. 2, pp. 692-709, 2009 DOI
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Stefan Plantikow, Kathrin Peter, Mikael Högqvist, Christian Grimme, Alexander Papaspyrou Generalizing the Data Management of Three Community Grids Future Generation Computer Systems (FGCS), Vol. 25, No. 3, pp. 281-289, 2009
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Artur Andrzejak Generic Self-Healing via Rejuvenation: Challenges, Status Quo, and Solutions Workshop on Architectures and Languages for Self-Managing Distributed Systems (SelfMan@SASO), San Francisco, California, USA, September, 2009
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Thorsten Schütt, Alexander Reinefeld, Florian Schintke, Marie Hoffmann Gossip-based Topology Inference for Efficient Overlay Mapping on Data Centers Peer-to-Peer Computing, September, pp. 147-150, 2009 DOI
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Alexander Reinefeld Heuristic Search Encyclopedia of Optimization, Christodoulos A. Floudas, Panos M. Pardalos (Eds.), pp. 1506-1508, Springer, 2009 DOI
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Artur Andrzejak, Demetris Zeinalipour, Marios D. Dikaiakos Improving the Dependability of Grids via Short-Term Failure Predictions CoreGRID Workshop at EuroPAR 2009, Delft, Netherlands, August, 2009
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Dagmar Krefting, Julian Bart, Kamen Beronov, Olga Dzhimova, Jürgen Falkner, Michael Hartung, Andreas Hoheisel, Tobias A. Knoch, Thomas Lingner, Yassene Mohammed, Kathrin Peter, Erhard Rahm, Ulrich Sax, Dietmar Sommerfeld, Thomas Steinke, Thomas Tolxdorff, Michal Vossberg, Fred Viezens, Anette Weisbecker MediGRID: Towards A User Friendly Secured Grid Infrastructure Future Generation Computer Systems (FGCS), Vol. 25, No. 3, pp. 281-289, 2009
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Alexander Reinefeld, Thorsten Schütt Out-of-Core Parallel Heuristic Search with MapReduce HPCS, June, 2009
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Alexander Reinefeld Parallel Heuristic Search Encyclopedia of Optimization, Christodoulos A. Floudas, Panos M. Pardalos (Eds.), pp. 2908-2912, Springer, 2009 DOI
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Mikael Högqvist, Nico Kruber Passive/Active Load Balancing with Informed Node Placement in DHTs IWSOS, Lecture Notes in Computer Science, December, Thrasyvoulos Spyropoulos, Karin Anna Hummel (Eds.), Vol. 5918, pp. 101-112, Springer, 2009 DOI
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Ralf Lützkendorf, Fred Viezens, Frank Hertel, Dagmar Krefting, Kathrin Peter, Johannes Bernarding Performanzsteigerung von Diffusion Tensor Image Analyse durch Nutzung gridbasierter Workflows GMDS, 2009 DOI
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T. Schütt, A. Reinefeld, F. Schintke, C. Hennig Self-Adaptation in Large-Scale Systems: A Study on Structured Overlays Across Multiple Datacenters Architectures and Languages for Self-Managing Distributed Systems (SelfMan@SASO), September, 2009
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Wolfgang Gentzsch, Alexander Reinefeld Special Section D-Grid Future Generation Comp. Syst., Vol. 25, No. 3, pp. 266-267, 2009 DOI
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M. Högqvist, S. Plantikow Towards Explicit Data Placement in Scalable Key/Value Stores Architectures and Languages for Self-Managing Distributed Systems (SelfMan@SASO), September, 2009
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Monika Moser, Seif Haridi, Tallat Shafaat, Thorsten Schütt, Mikael Högqvist, Alexander Reinefeld Transactional DHT Algorithms ZIB-Report 09-34 PDF


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Frank Dickmann, Mathias Kaspar, Benjamin Löhnhardt, Nick Kepper, Fred Viezens, Frank Hertel, Michael Lesnussa, Yassene Mohammed, Andreas Thiel, Thomas Steinke, Johannes Bernarding, Dagmar Krefting, Tobias A. Knoch, Ulrich Sax Visualization in Health Grid Environments: A Novel Service and Business Approach GECON, Lecture Notes in Computer Science, August, Vol. 5745, pp. 150-159, Springer, 2009 DOI
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Ada Casanovas, Javier Alonso, Jordi Torres, Artur Andrzejak Work in Progress: Building a Distributed Generic Stress Tool for Server Performance and Behavior Analysis ICAS, pp. 342-345, IEEE Computer Society, 2009 DOI
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2008

Thorsten Schütt, Monika Moser, Stefan Plantikow, Florian Schintke, Alexander Reinefeld A Transactional Scalable Distributed Data Store: Wikipedia on a DHT 1st IEEE International Scalable Computing Challenge, co-located with CCGrid'08, May, 2008
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Jörg Schneider, Julius Gehr, Barry Linnert, Thomas Röblitz An Efficient Protocol for Reserving Multiple Grid Resources in Advance Proceedings of the 3$^rd$ CoreGRID Workshop on Grid Middleware, Barcelona, Spain, June, 2008
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Stefan Plantikow, Mikael Högqvist Continous Queries over Federated Social Networks Fourth Doctoral Workshop on Mathematical and Engineering Methods in Computer Science (MEMICS 2008), Znojmo, Czech Republic, November, 2008
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Artur Andrzejak, Derrick Kondo, David P. Anderson Ensuring Collective Availability in Volatile Resource Pools via Forecasting 19th IEEE/IFIP Distributed Systems: Operations and Management (DSOM 2008), Samos Island, Greece, September, pp. 149-161, 2008
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F. Hupfeld, B. Kolbeck, J. Stender, M. Högqvist, T. Cortes, J. Martí, J. Malo FaTLease: Scalable Fault-Tolerant Lease Negotiation with Paxos ACM/IEEE International Symposium on High Performance Distributed Computing (HPDC), Boston, MA, USA, June, 2008
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Peter Sobe, Kathrin Peter Flexible Parameterization of XOR based Codes for Distributed Storage Proceedings of The Seventh IEEE International Symposium on Networking Computing and Applications, NCA 2008, July 10-12, 2008, Cambridge, Massachusetts, USA, pp. 101-110, IEEE Computer Society, 2008 DOI
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Thomas Röblitz Global Optimization for Scheduling Multiple Co-Reservations in the Grid Proceedings of the CoreGRID Symposium 2008, Las Palmas de Gran Canaria, Spain, August, 2008
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Artur Andrzejak, Alexander Reinefeld, Florian Schintke, T. Schütt, Carlo Mastroianni, Paraskevi Fragopoulou, Derrick Kondo, Paul Malecot, Gheorghe Cosmin Silaghi, Luis Moura Silva, Paolo Trunfio, Demetris Zeinalipour-Yazti, Eugenio Zimeo Grid Architectural Issues: State-of-the-art and Future Trends May, No. WHP-0004, 2008 PDF

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Tallat M. Shafaat, Monika Moser, Ali Ghodsi, Thorsten Schütt, Seif Haridi, Alexander Reinefeld Key-Based Consistency and Availability in Structured Overlay Networks International ICST Conference on Scalable Information Systems, June, 2008
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Tallat M. Shafaat, Monika Moser, Ali Ghodsi, Thorsten Schütt, Alexander Reinefeld On Consistency of Data in Structured Overlay Networks Coregrid Integration Workshop, April, 2008
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Derrick Kondo, Artur Andrzejak, David P. Anderson On Correlated Availability in Internet-Distributed Systems 9th IEEE/ACM International Conference on Grid Computing (Grid 2008), Tsukuba, Japan, September 29--October 1, 2008
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Mohammed Allalen, Matthias Brehm, Hinnerk Stüben Performance of Quantum Chromodynamics (QCD) Simulations on the SGI Altix Appeared in: Computational Methods in Science and Technology 14(2) (2008) 69-75, PDF (Preprint)


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Thorsten Schütt, Florian Schintke, Alexander Reinefeld Range Queries on structured overlay networks Computer Communications, Vol. 31, No. 2, pp. 280-291, Elsevier, 2008
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Thorsten Schütt, Florian Schintke, Alexander Reinefeld Scalaris: Reliable Transactional P2P Key/Value Store ACM SIGPLAN Erlang Workshop, September, 2008
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P. Van Roy, S. Haridi, A. Reinefeld, J.-B. Stefani, R. Yap, T. Coupaye Self Management for Large-Scale Distributed Systems: An Overview of the SELFMAN Project Formal Methods for Components and Objects 2007 (FMCO 2007), Springer LNCS, 2008
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Dagmar Krefting, Sebastian Canisius, Kathrin Peter, Thomas Tolxdorff, Thomas Penzel Signalanalyse von Polysomnographien unter Verwendung einer Gridinfrastruktur GMDS 2008, Stuttgart, Germany, September, 2008
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Paolo Costa, Guillaume Pierre, Alexander Reinefeld, Thorsten Schütt, Maarten van Steen Sloppy Management of Structured P2P Services Proceedings of the 3$^rd$ International Workshop on Hot Topics in Autonomic Computing (HotAC III), co-located with IEEE ICAC'08, Chicago, IL, USA, June, 2008
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Thomas Röblitz Specifying and Processing Co-Reservations in the Grid Proceedings of the 9$^th$ Workshop on Parallel Systems and Algorithms, Dresden, Germany, February, 2008
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J. Stender, B. Kolbeck, F. Hupfeld, E. Cesario, E. Focht, M. Hess, J. Malo, J. Martí Striping without Sacrifices: Maintaining POSIX Semantics in a Parallel File System Proceedings of the 1st USENIX Workshop on Large-Scale Computing (LASCO'08), Boston, MA, USA, June, 2008
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F. Hupfeld, T. Cortes, B. Kolbeck, E. Focht, M. Hess, J. Malo, J. Marti, J. Stender, E. Cesario The XtreemFS architecture - A case for object-based file systems in Grids Concurrency and Computation: Practice and Experience, Vol. 20, No. 8, 2008
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Stefan Plantikow, Alexander Reinefeld, Florian Schintke Transactions and Concurrency Control for Peer-to-Peer-Wikis: An Evaluation Making Grids Work, Marco Danelutto, Paraskevi Fragopoulo, Vladimir Getov (Eds.), pp. 337-349, 2008
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Mikael Högqvist, Seif Haridi, Nico Kruber, Alexander Reinefeld, Thorsten Schütt Using Global Information for Load Balancing in DHTs Workshop on Decentralized Self Management for Grids, P2P, and User Communities, October, 2008
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B. Mejías, M. Högqvist, P. Van Roy Visualizing Transactional Algorithms for DHTs IEEE P2P Conference, Aachen, Germany, September, 2008
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Toni Cortes, Carsten Franke, Yvon Jégou, Thilo Kielmann, Domenico Laforenz, Brian Matthews, Christine Morin, Luis Pablo Prieto, Alexander Reinefeld XtreemOS: A Vision for a Grid Operating System XtreemOS European Integrated Project, 2008
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2007

Nuno Rodrigues, Decio Sousa, Luis Moura Silva, Artur Andrzejak A Fault-Injector Tool to Evaluate Failure Detectors in Grid-services CoreGRID Workshop on Grid Programming Model Grid and P2P Systems Architecture Grid Systems, Crete, Greece, June, 2007
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Thorsten Schütt, Florian Schintke, Alexander Reinefeld A Structured Overlay for Multi-dimensional Range Queries Euro-Par Conference, LNCS, August, Luc Bougé, Thierry Priol Anne-Marie Kermarrec (Ed.), Vol. 4641, pp. 503-513, Springer, 2007 DOI
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Patrick May, Gunnar W. Klau, Markus Bauer, Thomas Steinke Accelerated microRNA-Precursor Detection Using the Smith-Waterman Algorithm on FPGAs GCCB, Lecture Notes in Bioinformatics, W. Dubitzky, et al. (Eds.), Vol. 4360, pp. 19-32, Springer, 2007
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Harry Enke, Matthias Steinmetz, Thomas Radke, Angelika Reiser, Thomas Röblitz, Mikael Högqvist AstroGrid-D: Enhancing Astronomic Science with Grid Technology German e-Science Conference, Max Planck Digital Library, 2007
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Monika Moser, Seif Haridi Atomic Commitment in Transactional DHTs Proceedings of the CoreGRID Symposium, Rennes, France, 2007
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Peter Sobe, Kathrin Peter Combining Compression, Encryption and Fault-tolerant Coding for Distributed Storage 21th International Parallel and Distributed Processing Symposium (IPDPS 2007) Proceedings, pp. 1-8, IEEE, 2007
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Hubert Busch, Ursula Droebes, Marek Fröhlich, Christian Schimmel Das Berliner Wissenschaftsnetz BRAIN 2007 ZIB-Report 07-42 PDF


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Michael Meyer, Thomas Steinke, Jürgen Sühnel Density functional study of isoguanine tetrad and pentad sandwich complexes with alkali metal ions Journal of Molecular Modeling, Vol. 13, No. 2, pp. 335-345, Springer Berlin / Heidelberg, 2007 DOI
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A. Reinefeld, F. Schintke, T. Schütt Device and method for retrieving / storing electronic data in a system with a plurality of data processing units United States Patent Application Publication No. US 2007/0165619 A1, July, 2007
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S. Plantikow, A. Reinefeld, F. Schintke Distributed Wikis on Structured Overlays CoreGrid Workshop on Grid Programming Models, Grid and P2P System Architecture, Grid Systems, Tools and Environments, June, 2007
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Javier Alonso, Luis Moura Silva, Artur Andrzejak, Jordi Torres High-Available Grid Services through the use of Virtualized Clustering IEEE-GRID, Austin, USA, September, 2007
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Artur Andrzejak, Monika Moser, Luis Silva Managing Performance of Aging Applications via Synchronized Replica Rejuvenation 18th IFIP/IEEE Distributed Systems: Operations and Management (DSOM 2007), LNCS, October, Alexander Clemm, Lisandro Zambenedetti Granville, Rolf Stadler (Eds.), Vol. 4785, Springer: Silicon Valley, CA, USA, 2007
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Samatha Kottha, Kathrin Peter, Thomas Steinke, Julian Bart, Jürgen Falkner, Anette Weisbecker, Fred Viezens, Yassene Mohammed, Ulrich Sax, Andreas Hoheisel, Thilo Ernst, Dietmar Sommerfeld, Dagmar Krefting, Michael Vossberg Medical Image Processing in MediGRID German E-Science Conference, Max Planck Digital Library: Baden-Baden, 2007
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Eric Stahlberg, Michael Babst, Daryl Popig, Thomas Steinke Molecular Dynamics with FPGAs: A Portable API International Supercomputing Conference 2007 (ISC 2007), Dresden, June, 2007
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Eric Stahlberg, Daryl Popig, Debie Ryle, Michael Babst, Mohammed Taherand Kelly Anderson, Thomas Steinke Molecular Simulations with Hardware Accelerators: A Portable Interface Definition for FPGA Supported Acceleration Reconfigurable Systems Summer Institute 2007 (RSSI 2007), National Center for Supercomputing Applications, Urbana/Illinois, July, 2007
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Christian Grimme, Tobias Langhammer, Alexander Papaspyrou, Florian Schintke Negotiation-based Choreography of Data-intensive Applications in the C3Grid Project German E-Science Conference, Max Planck Digital Library: Baden-Baden, 2007
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Alexander Reinefeld, Florian Schintke, Thorsten Schütt P2P Routing of Range Queries in Skewed Multidimensional Data Sets ZIB-Report 07-23 PDF


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A. Andrzejak, A. Reinefeld Paradigms for Scalable and Dependable Grids Future Generation Computer Systems (FGCS), Vol. 23, No. 7, 2007
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Thomas Granzer, Frank Breitling, Michael Braun, Harry Enke, Thomas Röblitz Providing Remote Access to Robotic Telescopes by Adopting Grid Technology German e-Science Conference, Max Planck Digital Library, 2007
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Thomas Streuer, Hinnerk Stüben Simulations of QCD in the Era of Sustained Tflop/s Computing Appeared in C. Bischof, M. Brückner, P. Gibbon, G. Goubert, T. Lippert, B. Mohr, F. Peters (Eds.), Parallel Computing: Architectures, Algorithms and Applications, NIC Series, Vol. 38 (2007), 535--542., PDF (Preprint)



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Mikael Högqvist, Thomas Röblitz, Alexander Reinefeld Stellaris: An RDF-based Information Service for AstroGrid-D German e-Science Conference, May, Max Planck Digital Library, 2007
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S. Plantikow, A. Reinefeld, F. Schintke Transactions for Distributed Wikis on Structured Overlays DSOM, LNCS, October, Alexander Clemm, Lisandro Zambenedetti Granville, Rolf Stadler (Eds.), Vol. 4785, pp. 256-267, Springer: Silicon Valley, CA, USA, 2007 DOI
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Paulo Silva, Luis Silva, Artur Andrzejak Using Micro-Reboots to Improve Software Rejuvenation in Apache Tomcat Institute on System Architecture, CoreGRID, 2007 PDF

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Luis Moura Silva, Javier Alonso, Paulo Silva, Jordi Torres, Artur Andrzejak Using Virtualization to Improve Software Rejuvenation IEEE International Symposium on Network Computing and Applications (IEEE-NCA), Cambridge, MA, USA, July, 2007
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A. Reinefeld, F. Schintke, T. Schütt Vorrichtung und Verfahren zum Abrufen / Speichern von elektronischen Daten in einem System mit mehreren Datenverarbeitungseinheiten Europäisches Patent EP 1 744 257 A1, January, 2007
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A. Reinefeld, F. Schintke, T. Schütt Vorrichtung und Verfahren zum Speichern / Abrufen von Objekten mit mehrdimensional adressierten, elektronischen Daten Europäische Patentanmeldung Nr. 06012030.0 vom 12.06.2006, Patent Nr: 1868114, veröffentlicht im European Patent Bulletin, Nr. 51, 2007
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Felix Hupfeld, Toni Cortes, Bjoern Kolbeck, Jan Stender, Erich Focht, Matthias Hess, Jesus Malo, Jonathan Marti, Eugenio Cesario XtreemFS: a case for object-based storage in Grid data management 3rd VLDB Workshop on Data Management in Grids, co-located with VLDB 2007, Vienna, Austria, 2007
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2006

Domenico Talia, Paolo Trunfio, Jingdi Zeng, Mikael Högqvist A DHT-based Peer-to-Peer Framework for Resource Discovery in Grids Institute on System Architecture, CoreGRID - Network of Excellence, 2006 PDF

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Domenico Talia, Paolo Trunfio, Jingdi Zeng, Mikael Högqvist A Peer-to-Peer Framework for Resource Discovery in Large-Scale Grids CoreGRID Integration Workshop, October, 2006
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Patrick May, Markus Bauer, Christian Köberle, Gunnar Klau A computational approach to microRNA detection ZIB-Report 06-44 PDF


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Christoph Armin Herrmann, Tobias Langhammer Combining partial evaluation and staged interpretation in the implementation of domain-specific languages Sci. Comput. Program., Vol. 62, No. 1, pp. 47-65, 2006 DOI
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B. Kolbeck, P. May, T. Schmidt-Goenner, T. Steinke, E. W. Knapp Connectivity independent protein-structure alignment: a hierarchical approach BMC Bioinformatics, Vol. 7, p. 510, 2006
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Artur Andrzejak, Stefan Plantikow Defining Fuzzy Logic Controllers with Scarce Model Data First International Workshop on Feedback Control Implementation and Design in Computing Systems and Networks FeBID'06 (colocated with NOMS'06), Vancouver, Canada, April, 2006
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Artur Andrzejak, Luis Silva Deterministic Models of Software Aging and Optimal Rejuvenation Schedules Institute on System Architecture, CoreGRID, 2006 PDF

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T. Steinke, A. Reinefeld, T. Schütt Experiences with High-Level Programming of FPGAs on Cray XD1 CUG Proceedings, 2006
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K. Peter, P. Sobe Flexible Definition of Data and Redundancy Layout for Storage Systems Sixth European Dependable Computing Conference (EDCC-6), Proceedings Supplemental Volume, October, pp. 59-60, 2006
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Vladimir Getov, Domenico Laforenza, Alexander Reinefeld (Eds.) Future Generation Grids: Proceedings of the Workshop on Future Generation Grids, November 1-5, 2004, Dagstuhl, Germany Future Generation Grids, January, Springer, 2006
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Artur Andrzejak, Alexander Reinefeld, Florian Schintke, Thorsten Schütt On Adaptability in Grid Systems Future Generation Grids: Proceedings of the Workshop on Future Generation Grids, November 1-5, 2004, Dagstuhl, Germany, January, Vladimir Getov, Domenico Laforenza, Alexander Reinefeld (Eds.), pp. 29-46, Springer, 2006 DOI
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Thomas Röblitz, Krzysztof Rzadca On the Placement of Reservations into Job Schedules Euro-Par 2006 Workshops: Parallel Processing, CoreGRID 2006, UNICORE Summit 2006, Petascale Computational Biology and Bioinformatics, Dresden, Germany, August 29-September 1, 2006, Revised Selected Papers, Lecture Notes in Computer Science, August, Wolfgang Lehner, Norbert Meyer, Achim Streit, Craig Stewart (Eds.), Vol. 4375, pp. 198-210, Springer, 2006 DOI
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Artur Andrzejak, Patrício Domingues, Luís Moura Silva Predicting Machine Availabilities in Desktop Pools Management of Integrated End-to-End Communications and Services, 10th IEEE/IFIP Network Operations and Management Symposium, NOMS 2006, Vancouver, Canada, April 3-7, 2006. Proceedings, April, Joseph L. Hellerstein, Burkhard Stiller (Eds.), IEEE, 2006 DOI
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Artur Andrzejak, Sven Graupner, Stefan Plantikow Predicting Resource Demand in Dynamic Utility Computing Environments 2006 International Conference on Autonomic and Autonomous Systems (ICAS 2006), 16-21 July 2006, Silicon Valley, California, USA, July, p. 6, IEEE Computer Society, 2006 DOI
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Thomas Röblitz, Florian Schintke, Alexander Reinefeld Resource reservations with fuzzy requests Concurrency and Computation: Practice and Experience, Vol. 18, No. 13, pp. 1681-1703, 2006 DOI
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Thorsten Schütt, Florian Schintke, Alexander Reinefeld Structured Overlay without Consistent Hashing: Empirical Results Sixth Workshop on Global and Peer-to-Peer Computing (GP2PC'06) at Sixth IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2006), 16-19 May 2006, Singapore, May, p. 8, IEEE Computer Society, 2006 DOI
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Patrick May, Thomas Steinke THESEUS - Protein Structure Prediction at ZIB ZIB-Report 06-24 PDF



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Patrício Domingues, Artur Andrzejak, Luís Moura Silva Using Checkpointing to Enhance Turnaround Time on Institutional Desktop Grids Second International Conference on e-Science and Grid Technologies (e-Science 2006), 4-6 December 2006, Amsterdam, The Netherlands, December, p. 73, IEEE Computer Society, 2006 DOI
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F. Hupfeld, M. Gordon Using distributed consistent branching for efficient reconciliation of mobile workspaces International Conference on Collaborative Computing: Networking, Applications and Worksharing, Vol. 0, p. 8, IEEE Computer Society: Los Alamitos, CA, USA, 2006 DOI
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Patrick May, Hans-Christian Ehrlich, Thomas Steinke ZIB Structure Prediction Pipeline: Composing a Complex Biological Workflow Through Web Services Euro-Par 2006 Workshops: Parallel Processing, CoreGRID 2006, UNICORE Summit 2006, Petascale Computational Biology and Bioinformatics, Dresden, Germany, August 29-September 1, 2006, Revised Selected Papers, Lecture Notes in Computer Science, Wolfgang Lehner, Norbert Meyer, Achim Streit, Craig Stewart (Eds.), Vol. 4375, pp. 1148-1158, Springer, 2006 DOI
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2005

Jerry Rolia, Ludmila Cherkasova, Martin F. Arlitt, Artur Andrzejak A capacity management service for resource pools Proceedings of the Fifth International Workshop on Software and Performance, WOSP 2005, Palma, Illes Balears, Spain, July 12-14, pp. 229-237, 2005 DOI
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Artur Andrzejak, Mehmet Ceyran Characterizing and Predicting Resource Demand by Periodicity Mining J. Network Syst. Manage., Special Issue on Self-Managing Systems and Networks, Vol. 13, No. 2, 2005
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Thorsten Schütt, Florian Schintke, Alexander Reinefeld Chord#: Structured Overlay Network for Non-Uniform Load-Distribution ZIB-Report 05-40 PDF



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Thomas Röblitz, Alexander Reinefeld Co-reservation with the concept of virtual resources 5th International Symposium on Cluster Computing and the Grid (CCGrid 2005), 9-12 May, 2005, Cardiff, UK, May, pp. 398-406, IEEE Computer Society, 2005 DOI
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Silke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser Columba: an integrated database of proteins, structures, and annotations BMC Bioinformatics, Vol. 6, pp. 81-92, 2005 DOI
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J. Wendler, F. Schintke Executing and observing CFD applications on the Grid Future Generation Computer Systems the International Journal of Grid Computing: Theory, Methods and Applications, Vol. 21, No. 1, pp. 11-18, Elsevier Science Publishers, 2005 DOI
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Artur Andrzejak, Ulf Hermann, Akhil Sahai FEEDBACKFLOW -- An Adaptive Workflow Generator for Systems Management Second International Conference on Autonomic Computing (ICAC 2005), 13-16 June 2005, Seattle, WA, USA, June, pp. 335-336, IEEE Computer Society, 2005 DOI
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B. Kolbeck, T. Schmidt-Gönner, P. May, E.W. Knapp Protein structure alignment based on contact maps and secondary structure. Proceedings of the German Conference on Bioinformatics (GCB), pp. 122-123, 2005
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P. Van Roy, A. Ghodsi, S. Haridi, J-B. Stefani, T. Coupaye, A. Reinefeld, E. Winter, R. Yap Self Management of Large-Scale Distributed Systems by Combining Peer-to-Peer Networks and Components Institute on System Architecture, CoreGRID - Network of Excellence, 2005 PDF

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P. May, B. Kallies, T. Steinke THESEUS -- a parallel threading core for highthroughput protein structure prediction Proceedings of the 7th Congress of the World Association of Theoretically Orientes Chemists (WARTOC), January, 2005
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G. Allen, K. Davis, T. Goodale, A. Hutanu, H. Kaiser, T. Kielmann, A. Merzky, R. Van Nieuwpoort, A. Reinefeld, F. Schintke, T. Schütt, E. Seidel, B. Ullmer The Grid Application Toolkit: Toward Generic and Easy Application Programming Interfaces for the Grid Procceedings of the IEEE, Vol. 93, No. 3, pp. 534-550, IEEE Computer Society Press, 2005
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F. Schintke The ZIB distributed data management system Future Generation Grids, Dagstuhl Seminar Proceedings, November, M. Cosnard, V. Getov, D. Laforenza, A. Reinefeld (Eds.), No. 04451, p. 20, Internationales Begegnungs- und Forschungszentrum für Informatik (IBFI), Schloss Dagstuhl, Germany: Dagstuhl, Germany, 2005
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P. May, F. Krause, C. Ehrlich, J. Maaskola, T. Steinke ZIB threading pipeline - A webservice-based, distributed structure prediction workflow. Proceedings of the German Conference on Bioinformatics (GCB), pp. 125-126, 2005
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2004

E. Michalsky, A. Goede, R. Preissner, P. May, T. Steinke A distributed pipeline for structure prediction CASP6 Abstract Book, Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction, Gaeta, Italy, December, pp. 112-114, 2004
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Thomas Röblitz, Florian Schintke, Alexander Reinefeld, Olof Bärring, Maite Barroso Lopez, German Cancio, Sylvain Chapeland, Karim Chouikh, Lionel Cons, Piotr Poznanski, Philippe Defert, Jan Iven, Thorsten Kleinwort, Bernd Panzer-Steindel, Jaroslaw Polok, Catherine Rafflin, Alan Silverman, Tim Smith, Jan van Eldik, David Front, Massimo Biasotto, Cristina Aiftimiei, Enrico Ferro, Gaetano Maron, Andrea Chierici, Luca dell'Agnello, Marco Serra, Michele Michelotto, Lord Hess, Volker Lindenstruth, Frank Pister, Timm M. Steinbeck, David L. Groep, Martijn Steenbakkers, Oscar Koeroo, Wim Som de Cerff, Gerben Venekamp, Paul Anderson, Tim Colles, Alexander Holt, Alastair Scobie, Michael George, Andrew Washbrook, Rafael A. García Leiva Autonomic Management of Large Clusters and Their Integration into the Grid J. Grid Comput., Vol. 2, No. 3, pp. 247-260, 2004 DOI
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Li Xiao, Xiaodong Zhang, Artur Andrzejak, Songqing Chen Building a Large and Efficient Hybrid Peer-to-Peer Internet Caching System IEEE Trans. Knowl. Data Eng., Vol. 16, No. 6, pp. 754-769, 2004 DOI
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Kristian Rother, Heiko Müller, Silke Trißl, Ina Koch, Thomas Steinke, Robert Preissner, Cornelius Frömmel, Ulf Leser Columba: Multidimensional Data Integration of Protein Annotations Data Integration in the Life Sciences, First International Workshop, DILS 2004, Leipzig, Germany, March 25-26, Lecture Notes in Computer Science, March, Erhard Rahm (Ed.), Vol. 2994, pp. 156-171, Springer Berlin / Heidelberg, 2004 DOI
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Alexander Reinefeld, Florian Schintke Dienste und Standards für das Grid Computing E-Science and Grid - Ad-hoc-Netze - Medienintegration, 18. DFN-Arbeitstagung über Kommunikationsnetze, Düsseldorf, 2004, LNI, Jan von Knop, Wilhelm Haverkamp, Eike Jessen (Eds.), Vol. P-55, pp. 293-304, GI, 2004
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T. Röblitz, F. Schintke, J. Wendler Elastic Grid Reservations with User-Defined Optimization Policies Proceedings of the 2nd Workshop on Adaptive Grid Middleware (AGridM'04), in conjunction with PACT 2004, Antibes Juan-les-Pins, France, September, 2004
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Alexander Reinefeld, Florian Schintke Grid Services: Web Services zur Nutzung verteilter Ressourcen Informatik Spektrum, Vol. 27, No. 2, pp. 129-135, 2004 DOI
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J. Wendler, F. Schintke Grid-Enabled Computational Fluid Dynamics using FlowGrid Cracow Grid Workshop '03 Proceedings, February, pp. 59-66, Academic Computer Centre CYFRONET AGH: ul. Nawojki 11, 30-950 Krakow 61, P.O.Box 386, Poland, 2004
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Felix Hupfeld Log-Structured Storage for Efficient Weakly-Connected Replication 24th International Conference on Distributed Computing Systems Workshops (ICDCS 2004 Workshops), 23-24 March 2004, Hachioji, Tokyo, Japan, March, pp. 458-463, IEEE Computer Society, 2004 DOI
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S. Campadello, D. De Roure, B. Farshchian, M. Fehse, C. Goble, Y. Gui, M. Hermenegildo, K. Jeffery, D. Laforenza, P. Maccallum, J. Masso, T. Priol, A. Reinefeld, M. Riguidel, D. Snelling, D. Talia, T. A. Varvarigou Next Generation Grids 2 - Requirements and Options for European Grids Research 2005-2010 and Beyond NGG2 Group, 2004
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Patrick May, Stefan Barthel, Ina Koch PTGL - a web-based database application for protein topologies Bioinformatics, Vol. 20, No. 17, pp. 3277-3279, 2004 DOI
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Thorsten Schütt, André Merzky, Andrei Hutanu, Florian Schintke Remote partial file access using compact pattern descriptions 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), April 19-22, 2004, Chicago, Illinois, USA, April, pp. 482-489, IEEE Computer Society, 2004 DOI
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A. Reinefeld, F. Schintke, T. Schütt Scalable and Self-Optimizing Data Grids Vol. 6, pp. 30-60, World Scientific, 2004
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P. May, T. Steinke, M. Meyer THESEUS: A Parallel Threading Core Procs. 12th Internat. Conf. on Intelligent Systems for Mol. Bio. (ISMB) and 3rd European Conf. on Comp. Bio. (ECCB), Glasgow, August, p. 199, 2004
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2003

Florian Schintke, Thorsten Schütt, Alexander Reinefeld A Framework for Self-Optimizing Grids Using P2P Components 14th International Workshop on Database and Expert Systems Applications (DEXA'03), September 1-5, 2003, Prague, Czech Republic, September, pp. 689-693, IEEE Computer Society, 2003 DOI
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Sven Graupner, Artur Andrzejak, Vadim Kotov, Holger Trinks Adaptive Control Overlay for Service Management First Workshop on the Design of Self-Managing Systems (AASMS'03), San Francisco, June, 2003
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Jerry Rolia, Artur Andrzejak, Martin F. Arlitt Automating Enterprise Application Placement in Resource Utilities Self-Managing Distributed Systems, 14th IFIP/IEEE International Workshop on Distributed Systems: Operations and Management, DSOM 2003, Heidelberg, Germany, October 20-22, 2003, Proceedings, October, Marcus Brunner, Alexander Keller (Eds.), Vol. 2867, pp. 118-129, Springer Berlin / Heidelberg, 2003 DOI
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K. Rother, S. Trissl, H. Müller, P. May, R. Heek, R. Preissner, T. Steinke, I. Koch, U. Leser, C. Frömmel Columba - A Database of Annotations of Protein Structure ECCB - Proceedings of the European Conference on Computational Biology in conjunction with the French National Conference on Bioinformatics, September, C. Christophe, H.-P. Lenhof, M-F. Sagot (Eds.), pp. 109-110, 2003
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Artur Andrzejak, Komei Fukuda Debugging Distributed Computations by Reverse Search The 21st IASTED International Multi-Conference on Applied Informatics (AI 2003), February 10-13, 2003, Innsbruck, Austria, February, M. H. Hamza (Ed.), pp. 719-725, IASTED/ACTA Press, 2003
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Thorsten Schütt, Florian Schintke, Alexander Reinefeld Efficient Synchronization of Replicated Data in Distributed Systems Computational Science - ICCS 2003, International Conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003. Proceedings, Part I, Lecture Notes in Computer Science, June, Peter M. A. Sloot, David Abramson, Alexander V. Bogdanov, Jack Dongarra, Albert Y. Zomaya, Yuri E. Gorbachev (Eds.), Vol. 2657, pp. 274-283, Springer, 2003 DOI
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Thomas Röblitz, Florian Schintke, Alexander Reinefeld From Clusters to the Fabric: The Job Management Perspective 2003 IEEE International Conference on Cluster Computing (CLUSTER 2003), 1-4 December 2003, Kowloon, Hong Kong, China, December, pp. 468-473, IEEE Computer Society, 2003 DOI
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A. Reinefeld, F. Schintke Grid Computing in Deutschland Spektrum der Wissenschaft, pp. 72-73, Spektrum der Wissenschaft Verlagsgesellschaft, Heidelberg, 2003
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Felix Hupfeld Hierarchical Structures in Attribute-based Namespaces and their Application to Browsing ZIB-Report 03-06 PDF



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F. Cordes, R. Preissner, T. Steinke How Does a Protein Work? BioTOPics J. of Biotechnology Berlin-Brandenburg, Vol. 18, No. 2, pp. 4-5, 2003
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Artur Andrzejak, Emo Welzl In between k-Sets, j-Facets, and i-Faces: (i , j) - Partitions Discrete & Computational Geometry, Vol. 29, No. 1, pp. 105-131, 2003 DOI
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Artur Andrzejak Memory-Efficient and Fast Enumeration of Global States Seventh International Conference on Information Visualization, IV 2003, 16-18 July 2003, London, UK, Ebad Banissi, Katy Börner, Chaomei Chen, Gordon Clapworthy, Carsten Maple, Amy Lobben, Christopher J. Moore, Jonathan C. Roberts, Anna Ursyn, Jian Zhang (Eds.), pp. 189-193, IEEE Computer Society, 2003 DOI
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Florian Schintke, Alexander Reinefeld Modeling Replica Availability in Large Data Grids J. Grid Computing, Vol. 1, No. 2, pp. 219-227, 2003 DOI
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P. May, I. Koch PTGL - Protein Topology Graph Library ECCB - Proceedings of the European Conference on Computational Biology in conjunction with the French National Conference on Bioinformatics, September, C. Christophe, H.-P. Lenhof, M-F. Sagot (Eds.), pp. 193-194, 2003
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Jan Wendler, Joscha Bach Recognizing and Predicting Agent Behavior with Case Based Reasoning RoboCup 2003: Robot Soccer World Cup VII, Lecture Notes in Computer Science, Daniel Polani, Brett Browning, Andrea Bonarini, Kazuo Yoshida (Eds.), Vol. 3020, pp. 729-738, Springer, 2003 DOI
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Sven Graupner, Vadim E. Kotov, Artur Andrzejak, Holger Trinks Service-Centric Globally Distributed Computing IEEE Internet Computing, Vol. 7, No. 4, pp. 36-43, 2003 DOI
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Sven Graupner, Artur Andrzejak, Vadim E. Kotov Visualizing Topology in Self-Organizing Management Overlays Seventh International Conference on Information Visualization, IV 2003, 16-18 July 2003, London, UK, Ebad Banissi, Katy Börner, Chaomei Chen, Gordon Clapworthy, Carsten Maple, Amy Lobben, Christopher J. Moore, Jonathan C. Roberts, Anna Ursyn, Jian Zhang (Eds.), pp. 200-205, IEEE Computer Society, 2003 DOI
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2002

H.E. Bal, K.-P. Löhr, A. Reinefeld (Eds.) 2nd IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2002), 22-24 May 2002, Berlin, Germany CCGRID, IEEE Computer Society, 2002
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Alexander Reinefeld, Florian Schintke Concepts and Technologies for a Worldwide Grid Infrastructure Euro-Par 2002, Parallel Processing, 8th International Euro-Par Conference Paderborn, Germany, August 27-30, 2002, Proceedings, Lecture Notes in Computer Science, Burkhard Monien, Rainer Feldmann (Eds.), Vol. 2400, pp. 62-72, Springer, 2002 DOI
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Alexander Reinefeld, Hinnerk Stüben, Florian Schintke, George Din GuiGen: a toolset for creating customized interfaces for Grid user communities Future Generation Comp. Syst., Vol. 18, No. 8, pp. 1075-1084, 2002
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DOI
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Florian Schintke, Alexander Reinefeld On the Cost of Reliability in Large Data Grids Appeared under the title " Modeling Replica Availabilty in Large Data Grids" in: Journal of Grid Computing 1 (2003) pp. 219-227, PDF (Preprint)



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Jerry Rolia, Xiaoyun Zhu, Martin F. Arlitt, Artur Andrzejak Statistical Service Assurances for Applications in Utility Grid Environments 10th International Workshop on Modeling, Analysis, and Simulation of Computer and Telecommunication Systems (MASCOTS 2002), 11-16 October 2002, Fort Worth, Texas, USA, October, pp. 247-256, IEEE Computer Society, 2002 DOI
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H. Busch, S. Heidl, R. Staudemeyer, M. Stolle Teleimmersion -- Erfahrungen mit der Gigabit-Ethernet-Strecke zwischen Berlin und Hannover DFN-Mitteilungen, Vol. 58(3), pp. 7-9, 2002
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Last Update 06.05.2013