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Projects as Head

Oscillator

Synchronization and Geometric Structures of Stochastic Biochemical Oscillators

We study synchronization due to noise and/or coupling in dynamical systems with multiple time scales. The challenge of taming nonuniformly hyperbolic structures is faced...

Synchronization and Geometric Structures of Stochastic Biochemical Oscillators

Publications

2024
Critical surface adsorption of confined binary liquids with locally conserved mass and composition Molecular Physics, p. e2391998, 2024 Sutapa Roy, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Depinning transition of self-propelled particles Physical Review E, 110(6), p. L062601, 2024 Arthur Straube, Felix Höfling BibTeX
arXiv
DOI
Höfling, Felix, Prof. Dr.
Fluid flow inside slit-shaped nanopores: the role of surface morphology at the molecular scale 2024 (under review) Giorgia Marcelli, Tecla Bottinelli Montandon, Roya Ebrahimi Viand, Felix Höfling BibTeX
arXiv
Höfling, Felix, Prof. Dr.
Hydrogen diffusion in garnet: insights from atomistic simulations 2024 (under review) Xin Zhong, Felix Höfling, Timm John BibTeX
arXiv
Höfling, Felix, Prof. Dr.
Langevin equations and a geometric integration scheme for the overdamped limit of homogeneous rotational Brownian motion 2024 (under review) Felix Höfling, Arthur Straube BibTeX
arXiv
Höfling, Felix, Prof. Dr.
Memory effects in colloidal motion under confinement and driving J. Phys. A: Math. Theor., Vol.57, p. 295003, 2024 Arthur Straube, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Structure of liquid–vapor interfaces: perspectives from liquid state theory, large-scale simulations, and potential grazing-incidence X-ray diffraction J Chem Phys., Vol.160, p. 104107, 2024 Felix Höfling, Siegfried Dietrich BibTeX
arXiv
DOI
Höfling, Felix, Prof. Dr.
2023
Accurate reduced models for the pH oscillations in the urea-urease reaction confined to giant lipid vesicles The Journal of Physical Chemistry B, 127(13), pp. 2955-2967, 2023 (preprint available as ZIB-Report 22-21) Arthur Straube, Stefanie Winkelmann, Felix Höfling PDF (ZIB-Report)
BibTeX
arXiv
DOI
Höfling, Felix, Prof. Dr.
Chemical diffusion master equation: formulations of reaction-diffusion processes on the molecular level Journal of Mathematical Physics, 64(1), 2023 Mauricio del Razo, Stefanie Winkelmann, Rupert Klein, Felix Höfling BibTeX
DOI
arXiv
Höfling, Felix, Prof. Dr.
Gaining Cross-Platform Parallelism for HAL’s Molecular Dynamics Package using SYCL 29. PARS-Workshop 2023, Vol.36, Mitteilungen - Gesellschaft für Informatik e.V., Parallel-Algorithmen und Rechnerstrukturen, 2023 (accepted for publication) Viktor Skoblin, Felix Höfling, Steffen Christgau BibTeX
arXiv
Höfling, Felix, Prof. Dr.
2022
A probabilistic framework for particle-based reaction–diffusion dynamics using classical Fock space representations Letters in Mathematical Physics, 112(49), 2022 Mauricio del Razo, Daniela Frömberg, Arthur Straube, Christof Schütte, Felix Höfling, Stefanie Winkelmann BibTeX
arXiv
DOI
Höfling, Felix, Prof. Dr.
Spontaneous trail formation in populations of auto-chemotactic walkers New Journal of Physics, Vol.24, p. 013012, 2022 (preprint available as ZIB-Report 21-36) Zahra Mokhtari, Robert I. A. Patterson, Felix Höfling PDF (ZIB-Report)
BibTeX
DOI
Höfling, Felix, Prof. Dr.
2021
Continuous demixing transition of binary liquids: finite-size scaling from the analysis of sub-systems Advances Theory and Simulation, Vol.4, p. 2000235, 2021 Yogyata Pathania, Dipanjan Chakraborty, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Generalized master equation for first-passage problems in partitioned spaces Journal of Physics A: Mathematical and Theoretical, Vol.54, p. 215601, 2021 Daniela Frömberg, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Nonequilibrium induced by reservoirs: Physico-mathematical model and numerical tests Advances Theory and Simulation, Vol.4, p. 2100071, 2021 Rupert Klein, Roya Ebrahimi Viand, Felix Höfling, Luigi Delle Site BibTeX
DOI
Höfling, Felix, Prof. Dr.
Stochastic pH oscillations in a model of the urea–urease reaction confined to lipid vesicles J. Phys. Chem. Lett., Vol.12, pp. 9888-9893, 2021 Arthur Straube, Stefanie Winkelmann, Christof Schütte, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Thermodynamic relations at the coupling boundary in adaptive resolution simulations for open systems Advances Theory and Simulation, Vol.4, p. 2000303, 2021 Abbas Gholami, Felix Höfling, Rupert Klein, Luigi Delle Site BibTeX
DOI
Höfling, Felix, Prof. Dr.
2020
Finite-size corrections for the static structure factor of a liquid slab with open boundaries The Journal of Chemical Physics, Vol.153, p. 054119, 2020 Felix Höfling, Siegfried Dietrich BibTeX
DOI
Höfling, Felix, Prof. Dr.
Rapid onset of molecular friction in liquids bridging between the atomistic and hydrodynamic pictures Commun. Phys., Vol.3, p. 126, 2020 Arthur Straube, Bartosz G. Kowalik, Roland R. Netz, Felix Höfling BibTeX
DOI
Höfling, Felix, Prof. Dr.
Theory and simulation of open systems out of equilibrium The Journal of Chemical Physics, Vol.153, p. 101102, 2020 Roya Ebrahimi Viand, Felix Höfling, Rupert Klein, Luigi Delle Site BibTeX
DOI
Höfling, Felix, Prof. Dr.
2019
Diffusion-influenced reaction rates in the presence of pair interactions The Journal of Chemical Physics, Vol.151, p. 164105, 2019 Manuel Dibak, Christoph Fröhner, Frank Noé, Felix Höfling BibTeX
DOI
arXiv
Höfling, Felix, Prof. Dr.
Molecular Dynamics of Open Systems: Construction of a Mean‐Field Particle Reservoir Advanced Theory and Simulations, Vol.2, p. 1900014, 2019 Luigi Delle Site, Christian Krekeler, John Whittaker, Animesh Agarwal, Rupert Klein, Felix Höfling BibTeX
DOI
arXiv
Höfling, Felix, Prof. Dr.