Höfling, Prof. Dr. Felix

Position:

Head of Research Group

Division:

Parallel and Distributed Computing

Department:

Supercomputing

Research group:

Dynamics of Complex Materials

Mail:

hoefling

zib.de

Phone:

+49 30 838 - 50545

Projects

Head

Synchronization and Geometric Structures of Stochastic Biochemical Oscillators

Publications

2023 2022 2021 2020 2019

2023
Arthur Straube, Stefanie Winkelmann, Felix Höfling	Accurate reduced models for the pH oscillations in the urea-urease reaction confined to giant lipid vesicles	The Journal of Physical Chemistry B, 127(13), pp. 2955-2967, 2023 (preprint available as ZIB-Report 22-21)	PDF (ZIB-Report) BibTeX arXiv DOI
Mauricio del Razo, Stefanie Winkelmann, Rupert Klein, Felix Höfling	Chemical diffusion master equation: formulations of reaction-diffusion processes on the molecular level	Journal of Mathematical Physics, 64(1), 2023	BibTeX DOI arXiv
Arthur Straube, Felix Höfling	Depinning transition of self-propelled particles	2023 (under review)	BibTeX arXiv
Viktor Skoblin, Felix Höfling, Steffen Christgau	Gaining Cross-Platform Parallelism for HAL’s Molecular Dynamics Package using SYCL	29. PARS-Workshop 2023, Vol.36, Mitteilungen - Gesellschaft für Informatik e.V., Parallel-Algorithmen und Rechnerstrukturen, 2023 (accepted for publication)	BibTeX
2022
Mauricio del Razo, Daniela Frömberg, Arthur Straube, Christof Schütte, Felix Höfling, Stefanie Winkelmann	A probabilistic framework for particle-based reaction–diffusion dynamics using classical Fock space representations	Letters in Mathematical Physics, 112(49), 2022	BibTeX arXiv DOI
Zahra Mokhtari, Robert I. A. Patterson, Felix Höfling	Spontaneous trail formation in populations of auto-chemotactic walkers	New Journal of Physics, Vol.24, p. 013012, 2022 (preprint available as ZIB-Report 21-36)	PDF (ZIB-Report) BibTeX DOI
2021
Yogyata Pathania, Dipanjan Chakraborty, Felix Höfling	Continuous demixing transition of binary liquids: finite-size scaling from the analysis of sub-systems	Advances Theory and Simulation, Vol.4, p. 2000235, 2021	BibTeX DOI
Daniela Frömberg, Felix Höfling	Generalized master equation for first-passage problems in partitioned spaces	Journal of Physics A: Mathematical and Theoretical, Vol.54, p. 215601, 2021	BibTeX DOI
Rupert Klein, Roya Ebrahimi Viand, Felix Höfling, Luigi Delle Site	Nonequilibrium induced by reservoirs: Physico-mathematical model and numerical tests	Advances Theory and Simulation, Vol.4, p. 2100071, 2021	BibTeX DOI
Arthur Straube, Stefanie Winkelmann, Christof Schütte, Felix Höfling	Stochastic pH oscillations in a model of the urea–urease reaction confined to lipid vesicles	J. Phys. Chem. Lett., Vol.12, pp. 9888-9893, 2021	BibTeX DOI
Abbas Gholami, Felix Höfling, Rupert Klein, Luigi Delle Site	Thermodynamic relations at the coupling boundary in adaptive resolution simulations for open systems	Advances Theory and Simulation, Vol.4, p. 2000303, 2021	BibTeX DOI
2020
Felix Höfling, Siegfried Dietrich	Finite-size corrections for the static structure factor of a liquid slab with open boundaries	The Journal of Chemical Physics, Vol.153, p. 054119, 2020	BibTeX DOI
Arthur Straube, Bartosz G. Kowalik, Roland R. Netz, Felix Höfling	Rapid onset of molecular friction in liquids bridging between the atomistic and hydrodynamic pictures	Commun. Phys., Vol.3, p. 126, 2020	BibTeX DOI
Roya Ebrahimi Viand, Felix Höfling, Rupert Klein, Luigi Delle Site	Theory and simulation of open systems out of equilibrium	The Journal of Chemical Physics, Vol.153, p. 101102, 2020	BibTeX DOI
2019
Manuel Dibak, Christoph Fröhner, Frank Noé, Felix Höfling	Diffusion-influenced reaction rates in the presence of pair interactions	The Journal of Chemical Physics, Vol.151, p. 164105, 2019	BibTeX DOI arXiv
Luigi Delle Site, Christian Krekeler, John Whittaker, Animesh Agarwal, Rupert Klein, Felix Höfling	Molecular Dynamics of Open Systems: Construction of a Mean‐Field Particle Reservoir	Advanced Theory and Simulations, Vol.2, p. 1900014, 2019	BibTeX DOI arXiv