Projects
Projects as Member
Publications
2025
A connectomic resource for neural cataloguing and circuit dissection of the larval zebrafish brain
bioRxiv, 2025 (under review)
Mariela D. Petkova, Michał Januszewski, Tim Blakely, Kristian J. Herrera, Gregor F.P. Schuhknecht, Robert Tiller, Jinhan Choi, Richard L. Schalek, Jonathan Boulanger-Weill, Adi Peleg, Yuelong Wu, Shuohong Wang, Jakob Troidl, Sumit Kumar Vohra, Donglai Wei, Zudi Lin, Armin Bahl, Juan Carlos Tapia, Nirmala Iyer, Zachary T. Miller, Kathryn B. Hebert, Elisa C. Pavarino, Milo Taylor, Zixuan Deng, Moritz Stingl, Dana Hockling, Alina Hebling, Ruohong C. Wang, Lauren L. Zhang, Sam Dvorak, Zainab Faik, Kareem I. King, Jr., Pallavi Goel, Julian Wagner-Carena, David Aley, Selimzhan Chalyshkan, Dominick Contreas, Xiong Li, Akila V. Muthukumar, Marina S. Vernaglia, Teodoro Tapia Carrasco, Sofia Melnychuck, TingTing Yan, Ananya Dalal, James DiMartino, Sam Brown, Nana Safo-Mensa, Ethan Greenberg, Michael Cook, Samantha Finley, Miriam A. Flynn, Gary Patrick Hopkins, Julie Kovalyak, Meghan Leonard, Alanna Lohff, Christopher Ordish, Ashley L. Scott, Satoko Takemura, Claire Smith, John J. Walsh, Daniel R. Berger, Hanspeter Pfister, Stuart Berg, Christopher Knecht, Geoffrey W. Meissner, Wyatt Korff, Misha B Ahrens, Viren Jain, Jeff W. Lichtman, Florian Engert
BibTeX
DOI
Vohra, Sumit Kumar
DOI
Correlative light and electron microscopy reveals the fine circuit structure underlying evidence accumulation in larval zebrafish
bioRxiv, 2025 (under review)
Jonathan Boulanger-Weill, Florian Kaempf, Richard L. Schalek, Mariela Petkova, Sumit Kumar Vohra, Jay H. Savaliya, Yuelong Wu, Gregor F. P. Schuhknecht, Heike Naumann, Maren Eberle, Kim N. Kirchberger, Simone Rencken, Isaac H. Bianco, Daniel Baum, Filippo Del Bene, Florian Engert, Jeff W. Lichtman, Armin Bahl
BibTeX
DOI
Vohra, Sumit Kumar
DOI
Fishexplorer: A multimodal cellular atlas platform for neuronal circuit dissection in larval zebrafish
bioRxiv, 2025 (under review)
Sumit Kumar Vohra, Maren Eberle, Jonathan Boulanger-Weill, Mariela D. Petkova, Gregor F. P. Schuhknecht, Kristian J. Herrera, Florian Kämpf, Virginia M. S. Ruetten, Jeff W. Lichtman, Florian Engert, Owen Randlett, Armin Bahl, Yasuko Isoe, Hans-Christian Hege, Daniel Baum
BibTeX
DOI
Vohra, Sumit Kumar
DOI
2024
A Visual Interface for Exploring Hypotheses about Neural Circuits
IEEE Transactions on Visualization and Computer Graphics, 30(7), pp. 3945-3958, 2024 (preprint available as ZIB-Report 23-07)
Sumit Kumar Vohra, Philipp Harth, Yasuko Isoe, Armin Bahl, Haleh Fotowat, Florian Engert, Hans-Christian Hege, Daniel Baum
PDF (ZIB-Report)
BibTeX
DOI
Vohra, Sumit Kumar
BibTeX
DOI
Multi-species community platform for comparative neuroscience in teleost fish
bioRxiv, 2024 (under review, preprint available as )
Sumit Kumar Vohra, Kristian Herrera, Tinatini Tavhelidse-Suck, Simon Knoblich, Ali Seleit, Jonathan Boulanger-Weill, Sydney Chambule, Ariel Aspiras, Cristina Santoriello, Owen Randlett, Joachim Wittbrodt, Alexander Aulehla, Jeff W. Lichtman, Mark Fishman, Hans-Christian Hege, Daniel Baum, Florian Engert, Yasuko Isoe
BibTeX
DOI
Vohra, Sumit Kumar
DOI
2022
A Stratification Matrix Viewer for Analysis of Neural Network Data
Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM), 2022
Philipp Harth, Sumit Vohra, Daniel Udvary, Marcel Oberlaender, Hans-Christian Hege, Daniel Baum
BibTeX
DOI
Vohra, Sumit Kumar
DOI
Active Segmentation: Differential Geometry meets Machine Learning
Proceedings of the 23rd International Conference on Computer Systems and Technologies, pp. 1-6, 2022
Dimiter Prodanov, Sumit Kumar Vohra
BibTeX
DOI
Vohra, Sumit Kumar
DOI
2021
The Active Segmentation Platform for Microscopic Image Classification and Segmentation
Brain Sciences. 2021, 11(12), p. 1645, 2021
Sumit Kumar Vohra, Dimiter Prodanov
BibTeX
DOI
Vohra, Sumit Kumar
DOI