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Home  |  Members  |  Sikorski, Alexander

Sikorski, Alexander

Position: 
Staff
Room: 
4033
Division: 
Mathematics for Life and Materials Sciences
Department: 
Modeling and Simulation of Complex Processes
Research group: 
Computational Molecular Design
Mail: 
sikorskizib.de
Phone: 
+49 30 84185 - 199
Fax: 
+49 30 84185 - 125

Projects

Member

Uncertainty Quantification for Bayesian Inverse Problems with Applications to Systems Biology
Probing Scales in Equilibrated Systems by Optimal Nonequilibrium Forcing
Empirical Bayes methods in systems medicine

Publications

2020 2018 2017 2016 2015

2020

Renata Sechi, Alexander Sikorski, Marcus Weber Estimation of the Koopman Generator by Newton's Extrapolation Multiscale Modeling and Simulation, 2020 (revision under review) BibTeX
Ilja Klebanov, Alexander Sikorski, Christof Schütte, Susanna Röblitz Objective priors in the empirical Bayes framework Scandinavian Jornal of Statistics, 2020 BibTeX
DOI
Alexander Sikorski, Marcus Weber, Christof Schütte The Augmented Jump Chain - a sparse representation of time-dependent Markov jump processes Advanced Theory and Simulations, 2020 (accepted) BibTeX
arXiv

2018

Konstantin Fackeldey, Alexander Sikorski, Marcus Weber Spectral Clustering for Non-Reversible Markov Chains Computational and Applied Mathematics, 37(5), pp. 6376-6391, 2018 (preprint available as ZIB-Report 18-48) PDF (ZIB-Report)
BibTeX
DOI

2017

Alexander Sikorski An Information-Theoretic Empirical Bayes Method and its Application to a Systems Biology Model Master's thesis, Freie Universität Berlin, Susanna Röblitz (Advisor), 2017 PDF
BibTeX
URN

2016

Ilja Klebanov, Alexander Sikorski, Christof Schütte, Susanna Röblitz Empirical Bayes Methods for Prior Estimation in Systems Medicine ZIB-Report 16-57 PDF
BibTeX
URN
arXiv
Ilja Klebanov, Alexander Sikorski, Christof Schütte, Susanna Röblitz Empirical Bayes Methods, Reference Priors, Cross Entropy and the EM Algorithm ZIB-Report 16-56 PDF
BibTeX
URN
Ilja Klebanov, Alexander Sikorski, Christof Schütte, Susanna Röblitz Prior estimation and Bayesian inference from large cohort data sets ZIB-Report 16-09 PDF
PDF
BibTeX
URN

2015

Alexander Sikorski PCCA+ and Its Application to Spatial Time Series Clustering Bachelor's thesis, Freie Universität Berlin, Marcus Weber (Advisor), 2015 PDF
BibTeX
URN
  • Research
    • Solutions for Individualized Medicine
    • Molecular and Biological Processes
    • Materials and Optical Processes
    • Combinatorics and MINLP
    • MSO for Multiscale Systems
    • Robust Solutions under Uncertainty
    • Digital Humanities
    • Efficient Infrastructure and Logistics
    • Large-Scale Data Management, Curation & Analysis
    • Highly Parallel Computing
    • Scalable and Fault-Tolerant Algorithms
    • Publications
    • Books
    • Features
  • Institute
    • Research Campus MODAL
    • Intel IPCC Research Center
    • Joint Lab Optics
    • Oracle Center of Excellence
    • Organization
    • Organizational Chart
    • Committees and Regulations
    • Spin-Offs
    • Konrad Zuse
    • Hall of Fame
  • Research Services
    • Supercomputing
    • Data Archive
    • KOBV
    • BRAIN
    • Software
    • Room Reservation
    • Library
  • Members
  • Training & Outreach
    • Graduate Students
    • Scholarships
    • Lectures
    • Trainee Openings
    • Schools
    • Press
    • Public Events
    • Guided Tours
    • Alumni
    • Topics for theses
  • Contact