2020
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Vikram Sunkara, Gitta A. Heinz, Frederik F. Heinrich, Pawel Durek, Ali Mobasheri, Mir-Farzin Mashreghi, Annemarie Lang |
Combining segmental bulk- and single-cell RNA-sequencing to define the chondrocyte gene expression signature in the murine knee joint
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bioarxiv, 2020 (under review) |
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Annemarie Lang, Sarah Helfmeier, Jonathan Stefanowski, Aditi Kuppe, Vikram Sunkara, Moritz Pfeiffenberger, Angelique Wolter, Alexandra Damerau, Shabnam Hemmati-Sadeghi, Jochen Ringe, Rainer Haag, Anja E. Hauser, Max Löhning, Carsten Perka, Georg N. Duda, Paula Hoff, Katharina Schmidt-Bleek, Timo Gaber, Frank Buttgereit |
HIF-stabilization prevents delayed fracture healing
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bioarxiv, 2020 (under review) |
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Sourav Ray, Vikram Sunkara, Christof Schütte, Marcus Weber |
How to calculate pH-dependent binding rates for receptor-ligand systems based on thermodynamic simulations with different binding motifs
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ZIB-Report 20-18 |
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Sourav Ray, Vikram Sunkara, Christof Schütte, Marcus Weber |
How to calculate pH-dependent binding rates for receptor-ligand systems based on thermodynamic simulations with different binding motifs
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Molecular Simulation, 2020 |
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Vikram Sunkara, N. Alexia Raharinirina, Felix Peppert, Max von Kleist, Christof Schütte |
Inferring Gene Regulatory Networks from Single Cell RNA-seq Temporal Snapshot Data Requires Higher Order Moments
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ZIB-Report 20-25 |
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Felix Peppert, Max von Kleist, Christof Schütte, Vikram Sunkara |
On the sufficient condition for solving the gap-filling problem using deep convolutional neural networks
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IEEE, 2020 (under review) |
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Jan Möller, Ali Isbilir, Titiwat Sungkaworn, Brenda Osberg, Christos Karathanasis, Vikram Sunkara, Eugene O Grushevsky, Andreas Bock, Paolo Annibale, Mike Heilemann, Christof Schütte, Martin J. Lohse |
Single molecule mu-opioid receptor membrane-dynamics reveal agonist-specific dimer formation with super-resolved precision
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Nature Chemical Biology, Vol.16, pp. 946-954, 2020 |
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Daniel J. Laydon, Vikram Sunkara, Lies Boelen, Charles R. M. Bangham, Becca Asquith |
The relative contributions of infectious and mitotic spread to HTLV-1 persistence
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PLOS Computational Biology, 2020 |
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2019
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Vikram Sunkara
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Algebraic Expressions of Conditional Expectations in Gene Regulatory Networks
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Journal of Mathematical Biology, pp. 1779-1829, 2019 |
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Tobias Haase, Vikram Sunkara, Benjamin Kohl, Carola Meier, Patricia Bußmann, Jessica Becker, Michal Jagielski, Max von Kleist, Wolfgang Ertel |
Discerning the spatio-temporal disease patterns of surgically induced OA mouse models
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PLOS One, 14(4), 2019 |
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Vikram Sunkara
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On the Properties of the Reaction Counts Chemical Master Equation
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Entropy, 21(6), p. 607, 2019 |
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Julia Temp, Dominika Labuz, Roger Negrete, Vikram Sunkara, Halina Machelska |
Pain and knee damage in male and female mice in the medial meniscal transection-induced osteoarthritis
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Osteoarthritis and Cartilage, 2019 |
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Anika Rettig, Tobias Haase, Alexandr Pletnyov, Benjamin Kohl, Wolfgang Ertel, Max von Kleist, Vikram Sunkara |
SLCV – A Supervised Learning - Computer Vision combined strategy for automated muscle fibre detection in cross sectional images
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PeerJ, 2019 |
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