Winkelmann, Dr. Stefanie

Funktion:

Leitung Arbeitsgruppe

Raum:

4104

Bereich:

Mathematische Methoden für Lebens- und Materialwissenschaften

Abteilung:

Modeling and Simulation of Complex Processes

Arbeitsgruppe:

Computational Systems Biology

Mail:

winkelmann

zib.de

Telefon:

+49 30 84185 - 156

Fax:

+49 30 84185 - 107

Projekte

Leitung

Space-time stochastic models for neurotransmission processes

Mitglieder

Multiscale Modelling and Simulation for Spatiotemporal Master Equations

Publikationen

2021 2020 2019 2018 2017 2016 2015 2014 2013 2012

2021
Jan-Hendrik Niemann, Stefanie Winkelmann, Sarah Wolf, Christof Schütte	Agent-based modeling: Population limits and large timescales	Chaos: An Interdisciplinary Journal of Nonlinear Science, 31(3), 2021	PDF BibTeX URN DOI
Luzie Helfmann, Natasa Djurdjevac Conrad, Ana Djurdjevac, Stefanie Winkelmann, Christof Schütte	From interacting agents to density-based modeling with stochastic PDEs	Communications in Applied Mathematics and Computational Science, 16(1), pp. 1-32, 2021 (preprint available as )	BibTeX arXiv DOI
Stefanie Winkelmann, Johannes Zonker, Christof Schütte, Natasa Djurdjevac Conrad	Mathematical modeling of spatio-temporal population dynamics and application to the epidemic spreading	Mathematical Biosciences, 2021 (accepted for publication)	BibTeX
2020
Stefanie Winkelmann, Christof Schütte	Stochastic Dynamics in Computational Biology	Springer International Publishing, 2020, ISBN: 978-3-030-62386-9	BibTeX DOI
2019
Luzie Helfmann, Natasa Djurdjevac Conrad, Ana Djurdjevac, Stefanie Winkelmann, Christof Schütte	From interacting agents to density-based modeling with stochastic PDEs	ZIB-Report 19-21 (Comm. Appl. Math. Comp. Sci. 16(1):1-32, 2021)	PDF BibTeX URN
2018
Natasa Djurdjevac Conrad, Luzie Helfmann, Johannes Zonker, Stefanie Winkelmann, Christof Schütte	Human mobility and innovation spreading in ancient times: a stochastic agent-based simulation approach	EPJ Data Science, 7(1), 2018	BibTeX DOI
2017
Stefanie Winkelmann, Christof Schütte	Hybrid models for chemical reaction networks: Multiscale theory and application to gene regulatory systems	The Journal of Chemical Physics, 147(11), pp. 114115-1-114115-18, 2017 (preprint available as ZIB-Report 17-29)	PDF PDF (ZIB-Report) BibTeX DOI
Stefanie Winkelmann	Markov Control with Rare State Observation: Average Optimality	Markov Processes and Related Fields, Vol.23, pp. 1-34, 2017 (preprint available as ZIB-Report 16-59)	PDF (ZIB-Report) BibTeX
2016
Stefanie Winkelmann, Christof Schütte	The Spatiotemporal Master Equation: Approximation of Reaction-Diffusion Dynamics via Markov State Modeling	Journal of Chemical Physics, 145(21), 2016 (preprint available as ZIB-Report 16-60)	PDF PDF (ZIB-Report) BibTeX DOI
2015
Sulav Duwal, Stefanie Winkelmann, Christof Schütte, Max von Kleist	Optimal Treatment Strategies in the Context of 'Treatment for Prevention' against HIV/1 in Resource-Poor Settings	PloS Computational Biology, 11(4), 2015	BibTeX DOI
2014
Stefanie Winkelmann, Christof Schütte, Max von Kleist	Markov Control Processes with Rare State Observation: Theory and Application to Treatment Scheduling in HIV-1	Communications in Mathematical Sciences, 12(5), pp. 859-877, 2014 (preprint available as ZIB-Report 13-34)	PDF (ZIB-Report) BibTeX DOI
2013
Stefanie Winkelmann, Christof Schütte, Max von Kleist	Markov Control Processes with Rare State Observation: Sensitivity Analysis with Respect to Optimal Treatment Strategies against HIV-1	International Journal of Biomathematics and Biostatistics, 2(1), 2013	BibTeX
Stefanie Winkelmann	Markov Decision Processes with Information Costs	Doctoral thesis, Freie Universität Berlin, Christof Schütte (Advisor), 2013	BibTeX
2012
Christof Schütte, Stefanie Winkelmann, Carsten Hartmann	Optimal control of molecular dynamics using Markov state models	Math. Program. (Series B), 134(1), pp. 259-282, 2012	BibTeX