Zachow, Stefan, Dr.

Contact

Position

Head of Research Group

Room

4306

Phone

+49 30 84185-275

Website

https://www.zib.de/userpage/zachow/

Projects

Projects as Head

3D morphological analysis of root canals

This research investigates the improvement of root canal treatment (RCT) by analyzing the relationship between root canal morphologies and treatment failures. Facilitated...

3D morphological analysis of root canals

Non-rigid shape registration

This research explores convex optimization for deformable registration of 3D templates to 2D image data from multiple cameras, with the generalized projection model.

Non-rigid shape registration

Active Self

This research investigates human mimicry during real-time human-avatar interactions, emphasizing cognitive science and social resonance. By integrating tools like Unity...

Active Self

Individualized Morphological Analysis of the Human Spine

The causes of lower back pain (LBP) are still not fully understood. One essential part of a better understanding might be the association of LBP, spinal morphology, and... Individualized Morphological Analysis of the Human Spine

Projects as Member

Mesh2NURBS

Computer Aided Design (CAD) and Computer Aided Geometric Design (CAGD) are used heavily in the representation of three-dimensional objects. Other than the areas of civil...

Mesh2NURBS

Atlas-based 3D Image Segmentation

Segmentation of medical image data (CT, MRT, ...) is a prerequisite in computer assisted diagnosis and therapy planning. Due to the nature of medical images the task of...

Atlas-based 3D Image Segmentation

Publications

2025

Comparison of Global and Local Optimization Methods for Intensity-based 2D-3D Registration Computers in Biology and Medicine, Vol.186, p. 109574, 2025 Marko Leskovar, Mark Heyland, Adam Trepczynski, Stefan Zachow BibTeX
DOI

Shape-from-Template with Generalised Camera Image and Vision Computing, 2025 (accepted for publication) Agniva Sengupta, Stefan Zachow BibTeX

2024

Assessing the Effects of Sensory Modality Conditions on Object Retention across Virtual Reality and Projected Surface Display Environments Proceedings of the ACM on Human-Computer Interaction, 8(ISS), pp. 255-282, 2024 Lucas Siqueira Rodrigues, Timo Torsten Schmidt, John Nyakatura, Stefan Zachow, Johann Habakuk Israel, Thomas Kosch BibTeX
DOI

Comparing the Effects of Visual, Haptic, and Visuohaptic Encoding on Memory Retention of Digital Objects in Virtual Reality NordiCHI '24: Proceedings of the 13th Nordic Conference on Human-Computer Interaction, pp. 1-13, 2024 Lucas Siqueira Rodrigues, Timo Torsten Schmidt, Johann Habakuk Israel, John Nyakatura, Stefan Zachow, Thomas Kosch BibTeX
arXiv
DOI

Evaluating Visuohaptic Integration on Memory Retention of Morphological Tomographic Images The 19th ACM SIGGRAPH International Conference on Virtual-Reality Continuum and its Applications in Industry, pp. 1-10, 2024 Lucas Siqueira Rodrigues, John Nyakatura, Stefan Zachow, Johann Habakuk Israel, Thomas Kosch BibTeX
DOI

Impact of the External Knee Flexion Moment on Patello-Femoral Loading Derived from in vivo Loads and Kinematics Frontiers in Bioengineering and Biotechnology, Vol.12, 2024 Adam Trepczynski, Paul Kneifel, Mark Heyland, Marko Leskovar, Philippe Moewis, Philipp Damm, William R. Taylor, Stefan Zachow, Georg Duda BibTeX
DOI

Learning continuous shape priors from sparse data with neural implicit functions Medical Image Analysis, Vol.94, p. 103099, 2024 Tamaz Amiranashvili, David Lüdke, Hongwei Bran Li, Stefan Zachow, Bjoern Menze BibTeX
DOI

MorphoHaptics: An Open-Source Tool for Visuohaptic Exploration of Morphological Image Datasets Proceedings of the 21st International Conference on Culture and Computer Science, 2024 (accepted for publication) Lucas Siqueira Rodrigues, Thomas Kosch, John Nyakatura, Stefan Zachow, Johann Habakuk Israel BibTeX
arXiv

Surgical planning in HTO – Alternative approaches to the Fujisawa gold-standard Technology and Health Care, 2024 Igor Komnik, Johannes Funken, Stefan Zachow, Rüdiger Schmidt-Wiethoff, Andree Ellermann, Wolfgang Potthast BibTeX
DOI
URN

2023

Design Challenges and Opportunities of Fossil Preparation Tools and Methods Proceedings of the 20th International Conference on Culture and Computer Science: Code and Materiality, 2023 Lucas Siqueira Rodrigues, John Nyakatura, Stefan Zachow, Johann Habakuk Israel BibTeX
DOI

The impact of teeth and dental restorations on gray value distribution in cone-beam computer tomography - a pilot study International Journal of Implant Dentistry, 9(27), 2023 Oliver Wagendorf, Susanne Nahles, Kirstin Vach, Florian Kernen, Stefan Zachow, Max Heiland, Tabea Flügge BibTeX
DOI

VoxSculpt: An Open-Source Voxel Library for Tomographic Volume Sculpting in Virtual Reality 2023 9th International Conference on Virtual Reality (ICVR), Xianyang, China, 2023, pp. 515-523, 2023 Lucas Siqueira Rodrigues, Felix Riehm, Stefan Zachow, Johann Habakuk Israel BibTeX
DOI

2022

An Immersive Virtual Paleontology Application 13th International Conference on Human Haptic Sensing and Touch Enabled Computer Applications, EuroHaptics 2022, pp. 478-481, 2022 Lucas Siqueira Rodrigues, John Nyakatura, Stefan Zachow, Johann Habakuk Israel BibTeX
DOI

Dynamic pressure analysis of novel interpositional knee spacer implants in 3D-printed human knee models Scientific Reports, Vol.12, 2022 Korbinian Glatzeder, Igor Komnik, Felix Ambellan, Stefan Zachow, Wolfgang Potthast PDF
BibTeX
DOI

Landmark-free Statistical Shape Modeling via Neural Flow Deformations Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, Vol.13432, Lecture Notes in Computer Science, 2022 David Lüdke, Tamaz Amiranashvili, Felix Ambellan, Ivan Ezhov, Bjoern Menze, Stefan Zachow BibTeX
DOI
arXiv

Learning Shape Reconstruction from Sparse Measurements with Neural Implicit Functions Medical Imaging with Deep Learning, 2022 Tamaz Amiranashvili, David Lüdke, Hongwei Li, Bjoern Menze, Stefan Zachow PDF
BibTeX

The Open Virtual Mirror Framework for Enfacement Illusions - Enhancing the Sense of Agency With Avatars That Imitate Facial Expressions Behavior Research Methods, 2022 Carl Martin Grewe, Tuo Liu, Andrea Hildebrandt, Stefan Zachow BibTeX
DOI

2021

A Deep Learning Method for Automated Detection of Meniscal Tears in Meniscal Sub-Regions in 3D MRI Data Master's thesis, Freie Universität Berlin, Tack Alexander, Zachow Stefan (Advisors), 2021 Alexey Shestakov BibTeX

A deep multi-task learning method for detection of meniscal tears in MRI data from the Osteoarthritis Initiative database Frontiers in Bioengineering and Biotechnology, section Biomechanics, pp. 28-41, 2021 (preprint available as ZIB-Report 21-33) Alexander Tack, Alexey Shestakov, David Lüdke, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

A note on neurosurgical resection and why we need to rethink cutting Neurosurgery, 89(5), pp. 289-291, 2021 Thomas Picht, Maxime Le Calve, Rosario Tomasello, Lucius Fekonja, Mohammad Fardin Gholami, Matthias Bruhn, Carola Zwick, Jürgen P. Rabe, Claudia Müller-Birn, Peter Vajkoczy, Igor M. Sauer, Stefan Zachow, John A. Nyakatura, Patricia Ribault, Friedemann Pulvermüller BibTeX
DOI

AutoImplant 2020 - First MICCAI Challenge on Automatic Cranial Implant Design IEEE Transactions on Medical Imaging, 40(9), pp. 2329-2342, 2021 Jianning Li, Pedro Pimentel, Angelika Szengel, Moritz Ehlke, Hans Lamecker, Stefan Zachow, Laura Estacio, Christian Doenitz, Heiko Ramm, Haochen Shi, Xiaojun Chen, Franco Matzkin, Virginia Newcombe, Enzo Ferrante, Yuan Jin, David G. Ellis, Michele R. Aizenberg, Oldrich Kodym, Michal Spanel, Adam Herout, James G. Mainprize, Zachary Fishman, Michael R. Hardisty, Amirhossein Bayat, Suprosanna Shit, Bomin Wang, Zhi Liu, Matthias Eder, Antonio Pepe, Christina Gsaxner, Victor Alves, Ulrike Zefferer, Cord von Campe, Karin Pistracher, Ute Schäfer, Dieter Schmalstieg, Bjoern H. Menze, Ben Glocker, Jan Egger BibTeX
DOI

Establishment of a rolling-sliding test bench to analyze abrasive wear propagation of different bearing materials for knee implants Applied Sciences, 11(4), 2021 Jessica Hembus, Felix Ambellan, Stefan Zachow, Rainer Bader BibTeX
DOI

Fully automated Assessment of Knee Alignment from Full-Leg X-Rays employing a "YOLOv4 And Resnet Landmark regression Algorithm" (YARLA): Data from the Osteoarthritis Initiative Computer Methods and Programs in Biomedicine, 205(106080), 2021 Alexander Tack, Bernhard Preim, Stefan Zachow PDF
BibTeX
DOI

Geodesic B-Score for Improved Assessment of Knee Osteoarthritis Proc. Information Processing in Medical Imaging (IPMI), pp. 177-188, Lecture Notes in Computer Science, 2021 (preprint available as ZIB-Report 21-09) Felix Ambellan, Stefan Zachow, Christoph von Tycowicz PDF (ZIB-Report)
BibTeX
arXiv
DOI

Release of the FexMM for the Open Virtual Mirror Framework 2021 C. Martin Grewe, Stefan Zachow BibTeX
DOI

Rigid Motion Invariant Statistical Shape Modeling based on Discrete Fundamental Forms Medical Image Analysis, Vol.73, 2021 Felix Ambellan, Stefan Zachow, Christoph von Tycowicz BibTeX
DOI
arXiv

Simulation-to-Real domain adaptation with teacher-student learning for endoscopic instrument segmentation International Journal of Computer Assisted Radiology and Surgery, Vol.16, pp. 849-859, 2021 Manish Sahu, Anirban Mukhopadhyay, Stefan Zachow PDF
BibTeX
DOI
arXiv

Statistical Learning of Facial Expressions Improves Realism of Animated Avatar Faces Frontiers in Virtual Reality, Vol.2, pp. 1-13, 2021 Carl Martin Grewe, Tuo Liu, Christoph Kahl, Hildebrandt Andrea, Stefan Zachow BibTeX
DOI

Towards novel osteoarthritis biomarkers: Multi-criteria evaluation of 46,996 segmented knee MRI data from the Osteoarthritis Initiative PLOS One, 16(10), 2021 Alexander Tack, Felix Ambellan, Stefan Zachow BibTeX
DOI

Towards novel osteoarthritis biomarkers: Multi-criteria evaluation of 46,996 segmented knee MRI data from the Osteoarthritis Initiative (Supplementary Material) PLOS One, 16(10), 2021 Alexander Tack, Felix Ambellan, Stefan Zachow BibTeX
DOI

Unsupervised Detection of Disturbances in 2D Radiographs 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), pp. 367-370, 2021 Laura Estacio, Moritz Ehlke, Alexander Tack, Eveling Castro-Gutierrez, Hans Lamecker, Rensso Mora, Stefan Zachow BibTeX
DOI

VerSe: A Vertebrae labelling and segmentation benchmark for multi-detector CT images Medical Image Analysis, Vol.73, 2021 Anjany Sekuboyina, Malek E. Husseini, Amirhossein Bayat, Maximilian Löffler, Hans Liebl, Hongwei Li, Giles Tetteh, Jan Kukačka, Christian Payer, Darko Štern, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Tamaz Amiranashvili, Moritz Ehlke, Hans Lamecker, Sebastian Lehnert, Marilia Lirio, Nicolás Pérez de Olaguer, Heiko Ramm, Manish Sahu, Alexander Tack, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Kevin Brown, Alexandre Kirszenberg, Élodie Puybareau, Di Chen, Yiwei Bai, Brandon H. Rapazzo, Timyoas Yeah, Amber Zhang, Shangliang Xu, Feng Hou, Zhiqiang He, Chan Zeng, Zheng Xiangshang, Xu Liming, Tucker J. Netherton, Raymond P. Mumme, Laurence E. Court, Zixun Huang, Chenhang He, Li-Wen Wang, Sai Ho Ling, Lê Duy Huynh, Nicolas Boutry, Roman Jakubicek, Jiri Chmelik, Supriti Mulay, Mohanasankar Sivaprakasam, Johannes C. Paetzold, Suprosanna Shit, Ivan Ezhov, Benedikt Wiestler, Ben Glocker, Alexander Valentinitsch, Markus Rempfler, Björn H. Menze, Jan S. Kirschke BibTeX
DOI

2020

Analyzing laparoscopic cholecystectomy with deep learning: automatic detection of surgical tools and phases 28th International Congress of the European Association for Endoscopic Surgery (EAES), 2020 Manish Sahu, Angelika Szengel, Anirban Mukhopadhyay, Stefan Zachow BibTeX

Automated Virtual Reconstruction of Large Skull Defects using Statistical Shape Models and Generative Adversarial Networks Towards the Automatization of Cranial Implant Design in Cranioplasty, Vol.12439, pp. 16-27, 2020 Pedro Pimentel, Angelika Szengel, Moritz Ehlke, Hans Lamecker, Stefan Zachow, Laura Estacio, Christian Doenitz, Heiko Ramm BibTeX
DOI

Characterization of the Airflow within an Average Geometry of the Healthy Human Nasal Cavity Scientific Reports, 3755(10), 2020 Jan Brüning, Thomas Hildebrandt, Werner Heppt, Nora Schmidt, Hans Lamecker, Angelika Szengel, Natalja Amiridze, Heiko Ramm, Matthias Bindernagel, Stefan Zachow, Leonid Goubergrits BibTeX
DOI

Endo-Sim2Real: Consistency learning-based domain adaptation for instrument segmentation Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), Part III, Vol.12263, Lecture Notes in Computer Science, 2020 (preprint available as ) Manish Sahu, Ronja Strömsdörfer, Anirban Mukhopadhyay, Stefan Zachow BibTeX
DOI

Surgical phase recognition by learning phase transitions Current Directions in Biomedical Engineering (CDBME), 6(1), p. 20200037, 2020 Manish Sahu, Angelika Szengel, Anirban Mukhopadhyay, Stefan Zachow BibTeX
DOI

VerSe: A Vertebrae Labelling and Segmentation Benchmark for Multi-detector CT Images arXiv, 2020 Anjany Sekuboyina, Amirhossein Bayat, Malek E. Husseini, Maximilian Löffler, Hongwei Li, Giles Tetteh, Jan Kukačka, Christian Payer, Darko Štern, Martin Urschler, Maodong Chen, Dalong Cheng, Nikolas Lessmann, Yujin Hu, Tianfu Wang, Dong Yang, Daguang Xu, Felix Ambellan, Tamaz Amiranashvili, Moritz Ehlke, Hans Lamecker, Sebastian Lehnert, Marilia Lirio, Nicolás Pérez de Olaguer, Heiko Ramm, Manish Sahu, Alexander Tack, Stefan Zachow, Tao Jiang, Xinjun Ma, Christoph Angerman, Xin Wang, Qingyue Wei, Kevin Brown, Matthias Wolf, Alexandre Kirszenberg, Élodie Puybareau, Alexander Valentinitsch, Markus Rempfler, Björn H. Menze, Jan S. Kirschke PDF
BibTeX
arXiv

2019

A Collision-Aware Articulated Statistical Shape Model of the Human Spine Proc. of the 18th annual conference on Computer- and Robot-assisted Surgery (CURAC), pp. 58-64, 2019 Robert Joachimsky, Lihong Ma, Christian Icking, Stefan Zachow BibTeX

A Surface-Theoretic Approach for Statistical Shape Modeling Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), Part IV, pp. 21-29, Vol.11767, Lecture Notes in Computer Science, 2019 (preprint available as ZIB-Report 19-20) Felix Ambellan, Stefan Zachow, Christoph von Tycowicz PDF (ZIB-Report)
BibTeX
DOI

Accurate Automated Volumetry of Cartilage of the Knee using Convolutional Neural Networks: Data from the Osteoarthritis Initiative IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), pp. 40-43, 2019 (preprint available as ZIB-Report 19-05) Alexander Tack, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

An as-invariant-as-possible GL+(3)-based Statistical Shape Model Proc. 7th MICCAI workshop on Mathematical Foundations of Computational Anatomy (MFCA), pp. 219-228, Vol.11846, Lecture Notes in Computer Science, 2019 (preprint available as ZIB-Report 19-46) Felix Ambellan, Stefan Zachow, Christoph von Tycowicz PDF (ZIB-Report)
BibTeX
DOI

Automated Hip Knee Ankle Angle Determination using Convolutional Neural Networks Master's thesis, Otto-von-Guericke-Universität Magdeburg, Felix Ambellan, Alexander Tack, Stefan Zachow (Advisors), 2019 Henok Hagos Gidey PDF
BibTeX
URN

Automated Segmentation of Knee Bone and Cartilage combining Statistical Shape Knowledge and Convolutional Neural Networks: Data from the Osteoarthritis Initiative Medical Image Analysis, 52(2), pp. 109-118, 2019 (preprint available as ZIB-Report 19-06) Felix Ambellan, Alexander Tack, Moritz Ehlke, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

Automated Segmentation of Knee Bone and Cartilage combining Statistical Shape Knowledge and Convolutional Neural Networks: Data from the Osteoarthritis Initiative (Supplementary Material) Medical Image Analysis, 52(2), pp. 109-118, 2019 (OAI-ZIB dataset) Felix Ambellan, Alexander Tack, Moritz Ehlke, Stefan Zachow BibTeX
DOI

CATARACTS: Challenge on Automatic Tool Annotation for cataRACT Surgery Medical Image Analysis, 52(2), pp. 24-41, 2019 Hassan Al Hajj, Manish Sahu, Mathieu Lamard, Pierre-Henri Conze, Soumali Roychowdhury, Xiaowei Hu, Gabija Marsalkaite, Odysseas Zisimopoulos, Muneer Ahmad Dedmari, Fenqiang Zhao, Jonas Prellberg, Adrian Galdran, Teresa Araujo, Duc My Vo, Chandan Panda, Navdeep Dahiya, Satoshi Kondo, Zhengbing Bian, Jonas Bialopetravicius, Chenghui Qiu, Sabrina Dill, Anirban Mukhopadyay, Pedro Costa, Guilherme Aresta, Senthil Ramamurthy, Sang-Woong Lee, Aurelio Campilho, Stefan Zachow, Shunren Xia, Sailesh Conjeti, Jogundas Armaitis, Pheng-Ann Heng, Arash Vahdat, Beatrice Cochener, Gwenole Quellec BibTeX
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Comparison of 2D and 3D CNNs for Classification of Knee MRI Bachelor's thesis, Freie Universität Berlin, Alexander Tack, Felix Ambellan (Advisors), 2019 Mona Prendke PDF
BibTeX
URN

Digital Analysis of Nasal Airflow Facilitating Decision Support in Rhinosurgery Facial Plastic Surgery, 35(1), pp. 1-8, 2019 Thomas Hildebrandt, Jan Joris Bruening, Hans Lamecker, Stefan Zachow, Werner Heppt, Nora Schmidt, Leonid Goubergrits BibTeX
DOI

Generation and Visual Exploration of Medical Flow Data: Survey, Research Trends, and Future Challenges Computer Graphics Forum, 38(1), pp. 87-125, 2019 Steffen Oeltze-Jaffra, Monique Meuschke, Mathias Neugebauer, Sylvia Saalfeld, Kai Lawonn, Gabor Janiga, Hans-Christian Hege, Stefan Zachow, Bernhard Preim BibTeX
DOI

Localization and Classification of Teeth in Cone Beam CT using Convolutional Neural Networks Proc. of the 18th annual conference on Computer- and Robot-assisted Surgery (CURAC), pp. 182-188, 2019, ISBN: 978-3-00-063717-9 Mario Neumann, Olaf Hellwich, Stefan Zachow BibTeX

Statistical Shape Models - Understanding and Mastering Variation in Anatomy Biomedical Visualisation, Paul M. Rea (Ed.), Springer Nature Switzerland AG, 1, pp. 67-84, 2019, ISBN: 978-3-030-19384-3, ISBN: 978-3-030-19385-0 (preprint available as ZIB-Report 19-13) Felix Ambellan, Hans Lamecker, Christoph von Tycowicz, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

T1 and T2* mapping of the human quadriceps and patellar tendons using ultra-short echo-time (UTE) imaging and bivariate relaxation parameter-based volumetric visualization Magnetic Resonance Imaging, 63(11), pp. 29-36, 2019 Martin Krämer, Marta Maggioni, Nicholas Brisson, Stefan Zachow, Ulf Teichgräber, Georg Duda, Jürgen Reichenbach BibTeX
DOI

The Healthy Nasal Cavity - Characteristics of Morphology and Related Airflow Based on a Statistical Shape Model Viewed from a Surgeon’s Perspective Facial Plastic Surgery, 35(1), pp. 9-13, 2019 Thomas Hildebrandt, Jan Joris Bruening, Nora Laura Schmidt, Hans Lamecker, Werner Heppt, Stefan Zachow, Leonid Goubergrits BibTeX
DOI

2018

An Efficient Riemannian Statistical Shape Model using Differential Coordinates Medical Image Analysis, 43(1), pp. 1-9, 2018 (preprint available as ZIB-Report 16-69) Christoph von Tycowicz, Felix Ambellan, Anirban Mukhopadhyay, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

Automated Segmentation of Knee Bone and Cartilage combining Statistical Shape Knowledge and Convolutional Neural Networks: Data from the Osteoarthritis Initiative Medical Imaging with Deep Learning, 2018 Felix Ambellan, Alexander Tack, Moritz Ehlke, Stefan Zachow PDF
BibTeX

Changes in Knee Shape and Geometry Resulting from Total Knee Arthroplasty Journal of Engineering in Medicine, 232(1), pp. 67-79, 2018 Mohsen Akbari Shandiz, Paul Boulos, Stefan Sævarsson, Heiko Ramm, Chun Kit Fu, Stephen Miller, Stefan Zachow, Carolyn Anglin BibTeX
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Joint Feature Learning and Classification - Deep Learning for Surgical Phase Detection Master's thesis, Technische Universität Berlin, Manish Sahu (Advisor), 2018 Sabrina Dill BibTeX
URN

Knee Menisci Segmentation using Convolutional Neural Networks: Data from the Osteoarthritis Initiative Osteoarthritis and Cartilage, 26(5), pp. 680-688, 2018 (preprint available as ZIB-Report 18-15) Alexander Tack, Anirban Mukhopadhyay, Stefan Zachow PDF (ZIB-Report)
BibTeX
DOI

Knee Menisci Segmentation using Convolutional Neural Networks: Data from the Osteoarthritis Initiative (Supplementary Material) 2018 Alexander Tack, Anirban Mukhopadhyay, Stefan Zachow BibTeX
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Spotting the Details: The Various Facets of Facial Expressions ZIB-Report 18-06 Carl Martin Grewe, Gabriel Le Roux, Sven-Kristofer Pilz, Stefan Zachow PDF
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URN

Traumatic events in the life of the deep-sea cephalopod mollusc, the coleoid Spirula spirula ScienceDirect: Deep Sea Research Part I - Oceanographic Research, 142(12), pp. 127-144, 2018 Rene Hoffmann, Robert Lemanis, Lena Wulff, Stefan Zachow, Alexander Lukeneder, Christian Klug, Helmut Keupp BibTeX
DOI

Ultra-short echo-time (UTE) imaging of the knee with curved surface reconstruction-based extraction of the patellar tendon ISMRM (International Society for Magnetic Resonance in Medicine), 26th Annual Meeting 2018, Paris, France, 2018 Martin Krämer, Marta Maggioni, Christoph von Tycowicz, Nick Brisson, Stefan Zachow, Georg Duda, Jürgen Reichenbach BibTeX

Uncertainty in Temperature-Based Determination of Time of Death Heat and Mass Transfer, 54(9), pp. 2815-2826, 2018 (preprint available as ZIB-Report 17-18) Martin Weiser, Bodo Erdmann, Sebastian Schenkl, Holger Muggenthaler, Michael Hubig, Gita Mall, Stefan Zachow PDF (ZIB-Report)
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DOI

2017

Adaptive Algorithms for Optimal Hip Implant Positioning PAMM, 17(1), pp. 203-204, 2017 Marian Moldenhauer, Martin Weiser, Stefan Zachow BibTeX
DOI

Addressing multi-label imbalance problem of Surgical Tool Detection using CNN International Journal of Computer Assisted Radiology and Surgery, 12(6), pp. 1013-1020, 2017 Manish Sahu, Anirban Mukhopadhyay, Angelika Szengel, Stefan Zachow PDF
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Automatic CT-based finite element model generation for temperature-based death time estimation: feasibility study and sensitivity analysis International Journal of Legal Medicine, 131(3), pp. 699-712, 2017 Sebastian Schenkl, Holger Muggenthaler, Michael Hubig, Bodo Erdmann, Martin Weiser, Stefan Zachow, Andreas Heinrich, Felix Victor Güttler, Ulf Teichgräber, Gita Mall BibTeX
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Computerassistierte Auswahl und Platzierung von interpositionalen Spacern zur Behandlung früher Gonarthrose Proceedings of the Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie (CURAC), pp. 106-111, Vol.16, 2017 (preprint available as ZIB-Report 17-72) Robert Joachimsky, Felix Ambellan, Stefan Zachow PDF (ZIB-Report)
BibTeX
URN

Evaluating two methods for Geometry Reconstruction from Sparse Surgical Navigation Data Proceedings of the Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie (CURAC), pp. 24-30, Vol.16, 2017 (preprint available as ZIB-Report 17-71) Felix Ambellan, Alexander Tack, Dave Wilson, Carolyn Anglin, Hans Lamecker, Stefan Zachow PDF (ZIB-Report)
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URN

Face to Face-Interface +ultra. Knowledge & Gestaltung, pp. 320-321, Nikola Doll, Horst Bredekamp, Wolfgang Schäffner (Eds.), Seemann Henschel, 2017 Carl Martin Grewe, Stefan Zachow BibTeX

Integrating 2D and 3D shell morphology to disentangle the palaeobiology of ammonoids: A virtual approach Palaeontology, 61(1), pp. 89-104, 2017 René Hoffmann, Robert Lemanis, Janina Falkenberg, Steffen Schneider, Hendrik Wesendonk, Stefan Zachow BibTeX
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Numerical Analysis of Nasal Breathing - A Pilot Study Facial Plastic Surgery, 33(4), pp. 388-395, 2017 Jan Brüning, Leonid Goubergrits, Werner Heppt, Stefan Zachow, Thomas Hildebrandt BibTeX
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Pelvic and lower extremity physiological cross-sectional areas: An MRI study of the living young and comparison to published research literature Surgical and Radiologic Anatomy, 39(8), pp. 849-857, 2017 Juliane Lube, Natasha Flack, Sebastian Cotofana, Orkun Özkurtul, Stephanie Woodley, Stefan Zachow, Niels Hammer BibTeX
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Shape-aware Surface Reconstruction from Sparse 3D Point-Clouds Medical Image Analysis, Vol.38, pp. 77-89, 2017 Florian Bernard, Luis Salamanca, Johan Thunberg, Alexander Tack, Dennis Jentsch, Hans Lamecker, Stefan Zachow, Frank Hertel, Jorge Goncalves, Peter Gemmar PDF
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DOI

Surgical Tool Presence Detection for Cataract Procedures ZIB-Report 18-28 Manish Sahu, Sabrina Dill, Anirban Mukhopadyay, Stefan Zachow PDF
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URN

Validation of three-dimensional models of the distal femur created from surgical navigation point cloud data for intraoperative and postoperative analysis of total knee arthroplasty International Journal of Computer Assisted Radiology and Surgery, 12(12), pp. 2097-2105, 2017 David Wilson, Carolyn Anglin, Felix Ambellan, Carl Martin Grewe, Alexander Tack, Hans Lamecker, Michael Dunbar, Stefan Zachow PDF
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2016

Comparative cephalopod shell strength and the role of septum morphology on stress distribution PeerJ, Vol.4, p. e2434, 2016 Robert Lemanis, Stefan Zachow, René Hoffmann BibTeX
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Fully Automated and Highly Accurate Dense Correspondence for Facial Surfaces Computer Vision – ECCV 2016 Workshops, pp. 552-568, Vol.9914, 2016 Carl Martin Grewe, Stefan Zachow PDF
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Influence of pelvic tilt on functional acetabular orientation Technology and Health Care, 25(3), pp. 557-565, 2016 Robert Zahn, Sarah Grotjohann, Heiko Ramm, Stefan Zachow, Matthias Pumberger, Michael Putzier, Carsten Perka, Stephan Tohtz BibTeX
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Microtomography of the Baltic amber tick Ixodes succineus reveals affinities with the modern Asian disease vector Ixodes ovatus BMC Evolutionary Biology, 16(1), 2016 Jason Dunlop, Dmitry Apanaskevich, Jens Lehmann, Rene Hoffmann, Florian Fusseis, Moritz Ehlke, Stefan Zachow, Xianghui Xiao BibTeX
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Robust and Accurate Appearance Models Based on Joint Dictionary Learning Data from the Osteoarthritis Initiative Lecture Notes in Computer Science, Patch-Based Techniques in Medical Imaging. Patch-MI 2016, pp. 25-33, Vol.9993, 2016 Anirban Mukhopadhyay, Oscar Morillo, Stefan Zachow, Hans Lamecker BibTeX
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Shape-aware Surface Reconstruction from Sparse Data arXiv, p. 1602.08425v1, 2016 Florian Bernard, Luis Salamanca, Johan Thunberg, Alexander Tack, Dennis Jentsch, Hans Lamecker, Stefan Zachow, Frank Hertel, Jorge Goncalves, Peter Gemmar PDF
BibTeX
arXiv

Statistical Shape Modeling of Musculoskeletal Structures and Its Applications Computational Radiology for Orthopaedic Interventions, Springer, pp. 1-23, 2016, ISBN: 978-3-319-23481-6 Hans Lamecker, Stefan Zachow BibTeX
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The Evolution and Development of Cephalopod Chambers and Their Shape PLOS ONE, 11(3), 2016 Robert Lemanis, Dieter Korn, Stefan Zachow, Erik Rybacki, René Hoffmann BibTeX
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2015

3D Assessment of Osteosynthesis based on 2D Radiographs Proceedings of the Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie (CURAC), pp. 317-321, 2015 (preprint available as ZIB-Report 15-47) Moritz Ehlke, Mark Heyland, Sven Märdian, Georg Duda, Stefan Zachow PDF (ZIB-Report)
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A new approach using high-resolution computed tomography to test the buoyant properties of chambered cephalopod shells Paleobiology, 41(2), pp. 313-329, 2015 Robert Lemanis, Stefan Zachow, Florian Fusseis, René Hoffmann BibTeX
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Assessing the relative positioning of an osteosynthesis plate to the patient-specific femoral shape from plain 2D radiographs Proceedings of the 15th Annual Meeting of CAOS-International (CAOS), 2015 (preprint available as ZIB-Report 15-21) Moritz Ehlke, Mark Heyland, Sven Märdian, Georg Duda, Stefan Zachow PDF (ZIB-Report)
PDF (ZIB-Report)
BibTeX

Computational Planning in Facial Surgery Facial Plastic Surgery, 31(5), pp. 446-462, 2015 Stefan Zachow BibTeX
DOI

Fast and Accurate Digital Morphometry of Facial Expressions Facial Plastic Surgery, 31(05), pp. 431-438, 2015 Carl Martin Grewe, Lisa Schreiber, Stefan Zachow BibTeX
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GPU-accelerated denoising of large tomographic data sets with low SNR ZIB-Report 15-14 Julián Lamas-Rodríguez, Moritz Ehlke, René Hoffmann, Stefan Zachow PDF
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Measuring 3D knee dynamics using center out radial ultra-short echo time trajectories with a low cost experimental setup ISMRM (International Society for Magnetic Resonance in Medicine), 23rd Annual Meeting 2015, Toronto, Canada, 2015 Martin Krämer, Karl-Heinz Herrmann, Heide Boeth, Christoph von Tycowicz, Christian König, Stefan Zachow, Rainald Ehrig, Hans-Christian Hege, Georg Duda, Jürgen Reichenbach BibTeX

Pelvic tilt compensates for increased acetabular anteversion International Orthopaedics, 40(8), pp. 1571-1575, 2015 Robert Zahn, Sarah Grotjohann, Heiko Ramm, Stefan Zachow, Michael Putzier, Carsten Perka, Stephan Tohtz BibTeX
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The Facial Profile Facial Plastic Surgery, 31(5), pp. 419-420, 2015 Stefan Zachow, Werner Heppt BibTeX
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Towards Robust Measurement Of Pelvic Parameters From AP Radiographs Using Articulated 3D Models Computer Assisted Radiology and Surgery (CARS), 2015 (preprint available as ZIB-Report 15-11) Moritz Ehlke, Thomas Frenzel, Heiko Ramm, Mohsen Akbari Shandiz, Carolyn Anglin, Stefan Zachow PDF (ZIB-Report)
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Validation of Three Dimensional Models of the Distal Femur Created from Surgical Navigation Data Orthopedic Research Society Annual Meeting, Las Vegas, Nevada, 2015 David Wilson, Pia Bücher, Carl Martin Grewe, Valentin Mocanu, Carolyn Anglin, Stefan Zachow, Michael Dunbar BibTeX

Validation of Three Dimensional Models of the Distal Femur Created from Surgical Navigation Point Cloud Data 15th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery (CAOS), 2015 David Wilson, Pia Bücher, Carl Martin Grewe, Carolyn Anglin, Stefan Zachow, Dunbar Michael BibTeX

2014

Frame-based cranial reconstruction Journal of Neurosurgery: Pediatrics, 13(3), pp. 319-323, 2014 Mascha Hochfeld, Hans Lamecker, Ulrich W. Thomale, Matthias Schulz, Stefan Zachow, Hannes Haberl BibTeX
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Non-invasive imaging methods applied to neo- and paleontological cephalopod research Biogeosciences, 11(10), pp. 2721-2739, 2014 (preprint available as ZIB-Report 14-18) René Hoffmann, Julia A. Schultz, Rico Schellhorn, Erik Rybacki, Helmut Keupp, S. R. Gerden, Robert Lemanis, Stefan Zachow PDF (ZIB-Report)
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Relationship between the shape and density distribution of the femur and its natural frequencies of vibration Journal of Biomechanics, Vol.47, pp. 3334-3343, 2014 Gianni Campoli, Nora Baka, Bart Kaptein, Edward Valstar, Stefan Zachow, Harrie Weinans, Amir Abbas Zadpoor BibTeX
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Robust Measurement of Natural Acetabular Orientation from AP Radiographs using Articulated 3D Shape and Intensity Models ZIB-Report 14-12 (Presented at the 14th Annual Meeting of CAOS-International (CAOS)) Moritz Ehlke, Thomas Frenzel, Heiko Ramm, Hans Lamecker, Mohsen Akbari Shandiz, Carolyn Anglin, Stefan Zachow PDF
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The Potential of Surface-based Geometric Morphometrics for Evolutionary Studies: An Example using Dwarf Snakes (Eirenis) Abstract in DigitalSpecimen 2014, 2014 Daniel Baum, Kristin Mahlow, Hans Lamecker, Stefan Zachow, Johannes Müller, Hans-Christian Hege BibTeX

2013

A large scale finite element study of a cementless osseointegrated tibial tray Journal of Biomechanics, 46(11), pp. 1900-1906, 2013 Francis Galloway, Max Kahnt, Heiko Ramm, Peter Worsley, Stefan Zachow, Prasanth Nair, Mark Taylor BibTeX
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Bimaxillary "rotation advancement" procedures in patients with obstructive sleep apnea: A 3-dimensional airway analysis of morphological changes International Journal of Oral & Maxillofacial Surgery, 42(5), pp. 569-578, 2013 Max Zinser, Stefan Zachow, Hermann Sailer BibTeX
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Evaluation of the Intranasal Flow Field through Computational Fluid Dynamics (CFD) Journal of Facial and Plastic Surgery, 29(2), pp. 93-98, 2013 Thomas Hildebrandt, Leonid Goubergrits, Werner Heppt, Stefan Bessler, Stefan Zachow BibTeX
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Fast Generation of Virtual X-ray Images for Reconstruction of 3D Anatomy IEEE Transactions on Visualization and Computer Graphics, 19(12), pp. 2673-2682, 2013 (preprint available as ZIB-Report 13-38) Moritz Ehlke, Heiko Ramm, Hans Lamecker, Hans-Christian Hege, Stefan Zachow PDF
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GPU-accelerated level-set segmentation Journal of Real-Time Image Processing, pp. 1-15, 2013 Julián Lamas-Rodríguez, Dora Blanco Heras, Francisco Argüello, Dagmar Kainmüller, Stefan Zachow, Montserrat Bóo BibTeX
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Kinematic Differences Between Gender Specific And Traditional Knee Implants The Journal of Arthroplasty, 28(9), pp. 1543-1550, 2013 Stefan Saevarsson, Gulshan Sharma, Heiko Ramm, Robert Lieck, Carol Hutchison, Jason Werle, Sigrun Montgomery, Carolina Romeo, Stefan Zachow, Carolyn Anglin BibTeX
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Landmark-based Statistical Shape Analysis Auxology - Studying Human Growth and Development url, pp. 199-201, Michael Hermanussen (Ed.), Schweizerbart Verlag, Stuttgart, 2013 Carl Martin Grewe, Hans Lamecker, Stefan Zachow BibTeX

Omnidirectional Displacements for Deformable Surfaces Medical Image Analysis, 17(4), pp. 429-441, 2013 Dagmar Kainmüller, Hans Lamecker, Markus O. Heller, Britta Weber, Hans-Christian Hege, Stefan Zachow BibTeX
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Visual Support for Positioning Hearing Implants Proceedings of the 12th annual meeting of the CURAC society, Wolfgang Freysinger (Ed.), pp. 116-120, 2013 (preprint available as ZIB-Report 13-53) Heiko Ramm, Oscar Salvador Victoria Morillo, Ingo Todt, Hartmut Schirmacher, Arneborg Ernst, Stefan Zachow, Hans Lamecker PDF (ZIB-Report)
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2012

Analysis of inter-individual anatomical shape variations of joint structures Proc. Int. Society of Computer Assisted Orthopaedic Surgery (CAOS), 2012 Matthias Bindernagel, Dagmar Kainmüller, Heiko Ramm, Hans Lamecker, Stefan Zachow BibTeX

Automatic Detection and Classification of Teeth in CT Data Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), Nicholas Ayache, Hervé Delingette, Polina Golland, Kensaku Mori (Eds.), pp. 609-616, Vol.7510, Lecture Notes in Computer Science, 2012 The Duy Nguyen, Hans Lamecker, Dagmar Kainmüller, Stefan Zachow BibTeX

Automatic bone and tooth detection for CT-based dental implant planning Int. J. Computer Assisted Radiology and Surgery, 7, Supplement 1(1), pp. 293-294, 2012 The Duy Nguyen, Dagmar Kainmüller, Hans Lamecker, Stefan Zachow BibTeX

Computed tomography analysis of knee pose and geometry before and after total knee arthroplasty Journal of biomechanics, 45(13), pp. 2215-21, 2012 Karen Ho, Stefan Saevarsson, Heiko Ramm, Robert Lieck, Stefan Zachow, Gulshan Sharma, Erica Rex, Shahram Amiri, Barnabas Wu, Andre Leumann, Carolyn Anglin BibTeX
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Computergestützte Planung für die individuelle Implantatversorgung Health Academy, Wolfgang Niederlag, Heinz Lemke, Heinz-Otto Peitgen, Hans Lehrach (Eds.), pp. 145-158, 2012 Heiko Ramm, Stefan Zachow BibTeX

Efficient projection and deformation of volumetric intensity models for accurate simulation of X-ray images ZIB-Report 12-40 (Presented at the 12th Annual Meeting of CAOS-International (CAOS)) Moritz Ehlke, Heiko Ramm, Hans Lamecker, Stefan Zachow PDF
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Efficient projection and deformation of volumetric shape and intensity models for accurate simulation of X-ray images Eurographics Workshop on Visual Computing for Biomedicine (NVIDIA best poster award), 2012 Moritz Ehlke, Heiko Ramm, Hans Lamecker, Stefan Zachow BibTeX

Feature-Preserving, Multi-Material Mesh Generation using Hierarchical Oracles Proc. MICCAI Workshop on Mesh Processing in Medical Image Analysis (MeshMed), Joshua A. Levine, Rasmus R. Paulsen, Yongjie Zhang (Eds.), pp. 101-111, Vol.7599, Lecture Notes in Computer Science, 2012 Max Kahnt, Heiko Ramm, Hans Lamecker, Stefan Zachow BibTeX

Knee Pose and Geometry Pre- and Post-Total Knee Arthroplasty Using Computed Tomography 58th Annual Meeting of the Orthopaedic Research Society (ORS), San Francisco, CA, 2012 Gulshan Sharma, Karen Ho, Stefan Saevarsson, Heiko Ramm, Robert Lieck, Stefan Zachow, Carolyn Anglin BibTeX

Mathematische Therapie- und Operationsplanung pp. 89-90, Berliner Wirtschaftsgespräche e.V.: Berlin, 2012 Peter Deuflhard, Stefan Zachow BibTeX

Patientenspezifische Simulationsmodelle für die funktionelle Analyse von künstlichem Gelenkersatz Computer Aided Medical Engineering (CaMe), 3(2), pp. 30-36, 2012 Heiko Ramm, Max Kahnt, Stefan Zachow BibTeX

Radiological method for measuring patellofemoral tracking and tibiofemoral kinematics before and after total knee replacement Bone and Joint Research, 1(10), pp. 263-271, 2012 Stefan Saevarsson, Gulshan Sharma, Shahram Amiri, Sigrun Montgomery, Heiko Ramm, Derek Lichti, Robert Lieck, Stefan Zachow, Carolyn Anglin BibTeX
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Sequential-Biplane Radiography for Measuring Pre and Post Total Knee Arthroplasty Kinematics 58th Annual Meeting of the Orthopaedic Research Society (ORS), San Francisco, CA, 2012 Gulshan Sharma, Stefan Saevarsson, Shahram Amiri, Sigrun Montgomery, Heiko Ramm, Derek Lichti, Stefan Zachow, Carolyn Anglin BibTeX

2011

An Articulated Statistical Shape Model of the Human Knee Bildverarbeitung für die Medizin 2011, pp. 59-63, 2011 Matthias Bindernagel, Dagmar Kainmüller, Heiko Seim, Hans Lamecker, Stefan Zachow, Hans-Christian Hege BibTeX
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Digital morphometry: The Potential of Statistical Shape Models Anthropologischer Anzeiger. Journal of Biological and Clinical Anthropology, pp. 506-506, 2011 Carl Martin Grewe, Hans Lamecker, Stefan Zachow BibTeX

Non-invasive approach to shed new light on the buoyancy business of chambered cephalopods (Mollusca) Proc. of the Intl. Assoc. for Mathematical Geosciences, Salzburg, pp. 1-11, 2011 René Hoffmann, Stefan Zachow BibTeX
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Robust and Intuitive Meshing of Bone-Implant Compounds CURAC, pp. 71-74, 2011 Max Kahnt, Francis Galloway, Heiko Seim, Hans Lamecker, Mark Taylor, Stefan Zachow BibTeX

Temporal Subtraction of Chest Radiographs Compensating Pose Differences SPIE Medical Imaging, 2011 Jens von Berg, Jalda Dworzak, Tobias Klinder, Dirk Manke, Hans Lamecker, Stefan Zachow, Cristian Lorenz BibTeX

The medial-lateral force distribution in the ovine stifle joint during walking Journal of Orthopaedic Research, 29(4), pp. 567-571, 2011 William R. Taylor, Berry M. Pöpplau, Christian König, Rainald Ehrig, Stefan Zachow, Georg Duda, Markus O. Heller BibTeX
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2010

Automatische 3D Rekonstruktion des Unterkiefers und der Mandibulärnerven auf Basis dentaler Bildgebung Proc. BMT, Biomed Tech, pp. 35-36, Vol.55 (Suppl. 1), 2010 Hans Lamecker, Dagmar Kainmüller, Heiko Seim, Stefan Zachow BibTeX

Computerassistierte Chirugieplanung Computerassistierte Chirurgie, Peter Schlag, Sebastian Eulenstein, Thomas Lange (Eds.), Elsevier, pp. 119-149, 2010 Stefan Zachow, Horst Hahn, Thomas Lange BibTeX

Craniofacial Surgery Planning Based on Virtual Patient Models it - Information Technology, 52(5), pp. 258-263, 2010 Martin Weiser, Stefan Zachow, Peter Deuflhard BibTeX
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Improving Deformable Surface Meshes through Omni-directional Displacements and MRFs Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), Tianzi Navab, Josien P. W. Pluim, Max Viergever (Eds.), pp. 227-234, Vol.6361, Lecture Notes in Computer Science, 2010 Dagmar Kainmüller, Hans Lamecker, Heiko Seim, Stefan Zachow, Hans-Christian Hege BibTeX
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Model-based Auto-Segmentation of Knee Bones and Cartilage in MRI Data Proc. MICCAI Workshop Medical Image Analysis for the Clinic, B. v. Ginneken (Ed.), pp. 215-223, 2010 Heiko Seim, Dagmar Kainmüller, Hans Lamecker, Matthias Bindernagel, Jana Malinowski, Stefan Zachow BibTeX

Modellgestützte chirurgische Rekonstruktion komplexer Mittelgesichtsfrakturen Proc. BMT, Biomed Tech 2010, pp. 107-108, Vol.55 (Suppl 1), 2010 Stefan Zachow, Kim Kubiack, Jana Malinowski, Hans Lamecker, Harald Essig, Nils-Claudius Gellrich PDF
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More Mathematics into Medicine! Production Factor Mathematics, Springer, pp. 357-378, 2010 Peter Deuflhard, Olaf Dössel, Alfred Louis, Stefan Zachow BibTeX

The Digital Bee Brain: Integrating and Managing Neurons in a Common 3D Reference System Front. Syst. Neurosci., 4(30), 2010 Jürgen Rybak, Anja Kuß, Hans Lamecker, Stefan Zachow, Hans-Christian Hege, Matthias Lienhard, Jochen Singer, Kerstin Neubert, Randolf Menzel BibTeX
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2009

3D Reconstruction of the Human Rib Cage from 2D Projection Images using a Statistical Shape Model Int. J. Comput. Assist. Radiol. Surg., 5(2), pp. 111-124, 2009 Jalda Dworzak, Hans Lamecker, Jens von Berg, Tobias Klinder, Cristian Lorenz, Dagmar Kainmüller, Heiko Seim, Hans-Christian Hege, Stefan Zachow BibTeX
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A System for Unsupervised Extraction of Orthopaedic Parameters from CT Data GI Workshop Softwareassistenten - Computerunterstützung für die medizinische Diagnose und Therapieplanung, pp. 1328-1337, GI-Edition Lecture Notes in Informatics, 2009 Heiko Seim, Dagmar Kainmüller, Hans Lamecker, Stefan Zachow BibTeX

An Articulated Statistical Shape Model for Accurate Hip Joint Segmentation EBMC 2009. Int. Conf. of the IEEE Eng. in Med. and Biol. Society (EMBC), pp. 6345-6351, 2009 Dagmar Kainmüller, Hans Lamecker, Stefan Zachow, Hans-Christian Hege BibTeX

Automatic Extraction of Anatomical Landmarks from Medical Image Data: An Evaluation of Different Methods Proc. of IEEE Int. Symposium on Biomedical Imaging (ISBI), pp. 538-541, 2009 Heiko Seim, Dagmar Kainmüller, Markus O. Heller, Stefan Zachow, Hans-Christian Hege BibTeX

Automatic Extraction of Mandibular Nerve and Bone from Cone-Beam CT Data Proceedings of Medical Image Computing and Computer Assisted Intervention (MICCAI), Guang-Zhong Yang, David J. Hawkes, Daniel Rueckert, J. Alison Noble, Chris J. Taylor (Eds.), pp. 76-83, 2009 Dagmar Kainmüller, Hans Lamecker, Heiko Seim, Max Zinser, Stefan Zachow BibTeX

Computergestützte Planung zur chirurgischen Korrektur von frühkindlichen Schädelfehlbildungen (Craniosynostosen) Face 02/09, Int. Mag. of Orofacial Esthetics, Oemus Journale Leipzig, pp. 48-53, 2009 Stefan Zachow, Hans Lamecker, Maja Zöckler, Ernst Haberl BibTeX

Multi-object Segmentation with Coupled Deformable Models Annals of the British Machine Vision Association (BMVA), Vol.5, pp. 1-10, 2009 Dagmar Kainmüller, Hans Lamecker, Stefan Zachow BibTeX

Multi-object segmentation of head bones MIDAS Journal, 2009 Dagmar Kainmüller, Hans Lamecker, Heiko Seim, Stefan Zachow BibTeX

Visual Exploration of Nasal Airflow IEEE Transactions on Visualization and Computer Graphics, 15(8), pp. 1407-1414, 2009 Stefan Zachow, Philipp Muigg, Thomas Hildebrandt, Helmut Doleisch, Hans-Christian Hege BibTeX
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2008

Adaptive Remeshing of Non-Manifold Surfaces Eurographics 2008 Annex to the Conf. Proc., pp. 207-211, 2008 (preprint available as ZIB-Report 07-01) Michael Zilske, Hans Lamecker, Stefan Zachow PDF (ZIB-Report)
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Automatic Segmentation of the Pelvic Bones from CT Data Based on a Statistical Shape Model Eurographics Workshop on Visual Computing for Biomedicine (VCBM), pp. 93-100, 2008 Heiko Seim, Dagmar Kainmüller, Markus O. Heller, Hans Lamecker, Stefan Zachow, Hans-Christian Hege BibTeX

Bildanalyse, Visualisierung und Modellerstellung für die Implantatplanung im Mittelohr Proc. of Simulation and Visualization 2008, Helwig Hauser (Ed.), pp. 139-154, 2008 Jana Dornheim, Silvia Born, Stefan Zachow, Michael Gessat, Daniela Wellein, Gero Strauß, Bernhard Preim, Dirk Bartz BibTeX

Breathing Easily: Simulation of airflow in human noses can become a useful rhinosurgery planning tool ANSYS Advantage, Vol.Vol. II, No. 1, pp. 30-31, 2008 Alexander Steinmann, Peter Bartsch, Stefan Zachow, Thomas Hildebrandt BibTeX

Computergestützte Planung in der kraniofazialen Chirurgie Face 01/08, Int. Mag. of Orofacial Esthetics, pp. 43-49, 2008 Stefan Zachow, Peter Deuflhard BibTeX

Coupling Deformable Models for Multi-object Segmentation Proc. Int. Symp. on Computational Models for Biomedical Simulation (ISBMS), pp. 69-78, Springer LNCS 5104, 2008 Dagmar Kainmüller, Hans Lamecker, Stefan Zachow, Hans-Christian Hege BibTeX
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Generierung qualitativ hochwertiger Modelle für die Simulation von Blutfluss in zerebralen Aneurysmen Proc. of Simulation and Visualization 2008, Helwig Hauser (Ed.), pp. 221-235, 2008 Mathias Neugebauer, Gabor Janiga, Stefan Zachow, Özlem Krischek, Bernhard Preim BibTeX

Mehr Mathematik wagen in der Medizin acatech diskutiert, Produktionsfaktor Mathematik - Wie Mathematik Technik und Wirtschaft bewegt, Springer, pp. 435-459, 2008 (preprint available as ZIB-Report 08-25) Peter Deuflhard, Olaf Dössel, Alfred Louis, Stefan Zachow PDF (ZIB-Report)
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Model-based autosegmentation of the central brain of the honeybee, Apis mellifera, using active statistical shape models Proc. 1st INCF Congress of Neuroinformatics: Databasing and Modeling the Brain, 2008 Heiko Seim, Dagmar Kainmüller, Anja Kuss, Hans Lamecker, Stefan Zachow, Randolf Menzel, Juergen Rybak BibTeX
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Modellgestützte Operationsplanung in der Kopfchirurgie Modellgestützte Therapie, Wolfgang Niederlag, Heinz Lemke, Jürgen Meixensberger, Michael Baumann (Eds.), Health Academy, pp. 140-156, 2008 Stefan Zachow, Martin Weiser, Peter Deuflhard BibTeX

Multi-Object Segmentation with Coupled Deformable Models Proc. Medical Image Understanding and Analysis, pp. 34-38, 2008 Dagmar Kainmüller, Hans Lamecker, Stefan Zachow, Markus O. Heller, Hans-Christian Hege BibTeX

Segmentation of Bony Structures with Ligament Attachment Sites Bildverarbeitung für die Medizin 2008, pp. 207-211, GI Informatik aktuell, 2008 Heiko Seim, Hans Lamecker, Stefan Zachow BibTeX
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Towards model-based 3-D reconstruction of the human rib cage from radiographs Proc. 7. Jahrestagung der Deutschen Gesellschaft für Computer-Roboterassistierte Chirurgie (CURAC), pp. 193-196, 2008 Jalda Dworzak, Hans Lamecker, Jens von Berg, Tobias Klinder, Cristian Lorenz, Dagmar Kainmüller, Heiko Seim, Hans-Christian Hege, Stefan Zachow BibTeX

2007

3D Reconstruction of Individual Anatomy from Medical Image Data: Segmentation and Geometry Processing 25. ANSYS Conference & CADFEM Users’ Meeting, 2007 (preprint available as ZIB-Report 07-41) Stefan Zachow, Michael Zilske, Hans-Christian Hege PDF (ZIB-Report)
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A method for the three-dimensional statistical shape analysis of the bony orbit Proc. Computer Aided Surgery around the Head, pp. 94-97, 2007 Hans Lamecker, Lukas Kamer, Antonia Wittmers, Stefan Zachow, Thomas Kaup, Alexander Schramm, Hansrudi Noser, Beat Hammer BibTeX

Aesthetic and Function in Rhinoplasty Springer Journal, Vol.264 (Suppl 1), RL 126, p. 307, 2007 Werner Heppt, Thomas Hildebrandt, Alexander Steinmann, Stefan Zachow BibTeX

Geometric Meshes in Medical Applications - Steps towards a specification of Geometric Models in DICOM Int. J. of Computer Assisted Radiology and Surgery (CARS), pp. 440-442, 2007 Michael Gessat, Stefan Zachow, Oliver Burgert, Heinz Lemke BibTeX
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Innovation in der Funktionell-Ästhetischen Nasenchirurgie: Rhino-CFD Face, Int. Mag. of Orofacial Esthetics, pp. 20-23, 2007 Thomas Hildebrandt, Stefan Zachow, Alexander Steinmann, Werner Heppt BibTeX

Understanding nasal airflow via CFD simulation and visualization Proc. Computer Aided Surgery around the Head, pp. 173-176, 2007 Stefan Zachow, Alexander Steinmann, Thomas Hildebrandt, Werner Heppt BibTeX

2006

Automatic segmentation of mandibles in low-dose CT-data Int. J. Computer Assisted Radiology and Surgery, Vol.1(1), pp. 393-395, 2006 Hans Lamecker, Stefan Zachow, Antonia Wittmers, Britta Weber, Hans-Christian Hege, Barbara Elsholtz, Michael Stiller BibTeX

CFD simulation of nasal airflow: Towards treatment planning for functional rhinosurgery Int. J. of Computer Assisted Radiology and Surgery, pp. 165-167, 2006 Stefan Zachow, Alexander Steinmann, Thomas Hildebrandt, Rainer Weber, Werner Heppt BibTeX

Computer assisted planning in cranio-maxillofacial surgery Journal of Computing and Information Technology, Vol.14(1), pp. 53-64, 2006 Stefan Zachow, Hans-Christian Hege, Peter Deuflhard BibTeX

Is the course of the mandibular nerve deducible from the shape of the mandible? Int. J. of Computer Assisted Radiology and Surgery, pp. 415-417, 2006 Stefan Zachow, Hans Lamecker, Barbara Elsholtz, Michael Stiller BibTeX

Mathematics in Facial Surgery AMS Notices, 53(9), pp. 1012-1016, 2006 Peter Deuflhard, Martin Weiser, Stefan Zachow BibTeX

Surgical treatment of craniosynostosis based on a statistical 3D-shape model Int. J. Computer Assisted Radiology and Surgery, Vol.1(1), pp. 253-254, 2006 Hans Lamecker, Stefan Zachow, Hans-Christian Hege, Maja Zöckler BibTeX
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Three-dimensional statistical shape analysis - A useful tool for developing a new type of orbital implant? pp. 20-21, AO Development Institute, New Products Brochure 2/06, 2006 Lukas Kamer, Hansrudi Noser, Hans Lamecker, Stefan Zachow, Antonia Wittmers, Thomas Kaup, Alexander Schramm, Beat Hammer BibTeX

2005

3D osteotomy planning in maxillofacial surgery, including 3D soft tissue prediction Journal of Craniofacial Surgery, Vol.16(1), pp. 100-104, 2005 Anders Westermark, Stefan Zachow, Barry Eppley BibTeX

Computer assisted osteotomy planning in cranio-maxillofacial surgery under consideration of facial soft tissue changes Doctoral thesis, Technische Universität Berlin, 2005 Stefan Zachow BibTeX

Computergestützte 3D Osteotomieplanung in der Mund-Kiefer-Gesichtschirurgie unter Berücksichtigung der räumlichen Weichgewebeanordnung Doctoral thesis, Technische Universität Berlin, Heinz Lemke, Bernhard Preim, Hans-Florian Zeilhofer (Advisors), 2005, ISBN: 3899631986 Stefan Zachow PDF
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Fusion von optischen 3D- und CT-Daten des Gebisses zur Metallartefaktkorrektur vor computerassistierter Planung MKG-chirurgischer Eingriffe Symposium der Arbeitsgemeinschaf für Kieferchirurgie, 2005 Emeka Nkenke, Stefan Zachow, Gerd Häusler BibTeX

Maxillofacial surgery planning with 3D soft tissue prediction - modeling, planning, simulation 2. Int. Conf. on Advanced Digital Technology in Head and Neck Reconstruction, Abstract 33, p. 64, 2005 Stefan Zachow, Hans-Christian Hege, Peter Deuflhard BibTeX

Medical applications for statistical shape models Computer Aided Surgery around the Head, Fortschritt-Berichte VDI - Biotechnik/Medizintechnik, Vol.17 (258), p. 61, 2005 Hans Lamecker, Stefan Zachow, Hannes Haberl, Michael Stiller BibTeX

Reconstruction of mandibular dysplasia using a statistical 3D shape model Proc. Computer Assisted Radiology and Surgery (CARS), pp. 1238-1243, 2005 Stefan Zachow, Hans Lamecker, Barbara Elsholtz, Michael Stiller BibTeX
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Soft Tissue Prediction in Computer Assisted Maxillofacial Surgery Planning Biomechanics Applied to Computer Assisted Surgery, Y. Payan (Ed.), Research Signpost, pp. 277-298, 2005 Stefan Zachow, Martin Weiser, Hans-Christian Hege, Peter Deuflhard PDF
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Statistical shape modeling for craniosynostosis planning 2nd International Conference Advanced Digital Technology in Head and Neck Reconstruction 2005, Abstract Volume, p. 64, 2005 Hans Lamecker, Maja Zöckler, Hannes Haberl, Stefan Zachow, Hans-Christian Hege BibTeX

Streak artifact correction of CT data by optical 3D imaging in the simulation of orthognathic surgery Computer Assisted Radiology and Surgery (CARS), 2005 Emeka Nkenke, Gerd Häusler, Friedrich Neukam, Stefan Zachow BibTeX
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2004

A quantitative evaluation of 3D soft tissue prediction in maxillofacial surgery planning Proc. 3. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboter-assistierte Chirurgie e.V., 2004 Stefan Zachow, Thomas Hierl, Bodo Erdmann PDF
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Advances in 3D osteotomy planning with 3D soft tissue prediction Proc. 2nd International Symposium on Computer Aided Surgery around the Head, Abstract, p. 31, 2004 Stefan Zachow, Bodo Erdmann, Hans-Christian Hege, Peter Deuflhard BibTeX

Anatomy- and physics-based facial animation for craniofacial surgery simulations Med Biol Eng Comput., Vol.42(2), pp. 167-170, 2004 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
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Computer-based simulation in distraction osteogenesis Proc. of 3rd Int. Oxford Distraction Symposium of the Craniofacial Skeleton, pp. 33-34, 2004 Thomas Hierl, Stefan Zachow, Gert Wollny, Guntram Berti, Jens-Georg Schmidt, Jochen Fingberg BibTeX

Computergestützte Operationsplanung in der Gesichtschirurgie Proc. VDE Kongress 2004 - Innovationen für Menschen, Band 2, Fachtagungsberichte DGBMT - GMM - GMA, pp. 53-58, 2004 Stefan Zachow, Hans-Christian Hege, Peter Deuflhard BibTeX

Concepts of computer-based simulation in orthognathic surgery Journal of Cranio-Maxillofacial Surgery 32 Suppl. 1, pp. 81-82, 2004 Thomas Hierl, Stefan Zachow, Gert Wollny, Guntram Berti, Jens-Georg Schmidt, Jochen Fingberg BibTeX

Fusion of computed tomography data and optical 3D images of the dentition for streak artefact correction in the simulation of orthognathic surgery Journal of Dento-Maxillofacial Radiology, Vol.33, pp. 226-232, 2004 Emeka Nkenke, Stefan Zachow, Michaela Benz, Tobias Maier, Klaus Veit, Manuel Kramer, St. Benz, Gerd Häusler, Friedrich Neukam, Michael Lell BibTeX
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On the Predictability of tissue changes after osteotomy planning in maxillofacial surgery Computer Assisted Radiology and Surgery (CARS), pp. 648-653, 2004 Stefan Zachow, Thomas Hierl, Bodo Erdmann BibTeX
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Technical aspects and results of surgery for craniosynostosis Zentralblatt für Neurochirurgie, 65(2), pp. 65-74, 2004 Hannes Haberl, Bertold Hell, Maja Zöckler, Stefan Zachow, Hans Lamecker, Asita Sarrafzadeh, B. Riecke, Wolfgang Langsch, Peter Deuflhard, Jürgen Bier, Mario Brock BibTeX

Über die Genauigkeit einer 3D Weichgewebeprädiktion in der MKG-Cirurgie Workshop ’Bildverarbeitung für die Medizin’ (BVM), pp. 75-79, 2004 Stefan Zachow, Thomas Hierl, Bodo Erdmann BibTeX

2003

Draw & Cut: Intuitive 3D Osteotomy Planning on Polygonal Bone Models Computer Assisted Radiology and Surgery (CARS), pp. 362-369, 2003 Stefan Zachow, Evgeny Gladilin, Robert Sader, Hans-Florian Zeilhofer BibTeX
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On constitutive modeling of soft tissue for the long-term prediction of cranio-maxillofacial surgery outcome International Congress Series, CARS2003, Computer Assisted Radiology and Surgery, Proceedings of the 17th International Congress and Exhibition, pp. 343-348, Vol.1256, 2003 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
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Realistic prediction of individual facial emotion expressions for craniofacial surgery simulations Proc. SPIE medical Imaging 2003, Robert Galloway (Ed.), pp. 520-527, Vol.5029, 2003 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
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2002

3D Osteotomy Planning in Cranio-Maxillofacial Surgery: Experiences and Results of Surgery Planning and Volumetric Finite-Element Soft Tissue Prediction in Three Clinical Cases Computer Assisted Radiology and Surgery (CARS), pp. 983-987, 2002 Stefan Zachow, Evgeny Gladilin, Adam Trepczynski, Robert Sader, Hans-Florian Zeilhofer BibTeX

A nonlinear elastic soft tissue model for craniofacial surgery simulations ESAIM, Proc., Vol.12, pp. 61-66, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
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A nonlinear soft tissue model for craniofacial surgery simulations Proc. of Modeling and Simulation for Computer-aided Medicine and Surgery (MS4CMS, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

Adaptive Nonlinear Elastic FEM for Realistic Prediction of Soft Tissue in Craniofacial Surgery Simulations Proc. SPIE Medical Imaging 2002, Seong K. Mun (Ed.), pp. 1-8, Vol.4681, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
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Biomechanical modeling of individual facial emotion expressions Proc. of Visualization, Imaging, and Image Processing (VIIP), pp. 7-11, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

Biomechanisches Modell zur Abschätzung der individuellen Gesichtsmimik Proc.of Workshop Bildverarbeitung für die Medizin (BVM), M. Meiler, D. Saupe, F. Krugel, H. Handels, T. Lehmann (Eds.), pp. 25-28, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

From Image Data to Three-Dimensional Models - Case Studies on the Impact of 3D Patient Models Proceedings of the Japan Korea Computer Graphics Conference 2002, 2002 Hans-Christian Hege, Hartmut Schirmacher, Malte Westerhoff, Hans Lamecker, Steffen Prohaska, Stefan Zachow BibTeX

Shape-based Modeling Approach for the Estimation of Individual Facial Mimics in Craniofacial Surgery Planning Proc. SPIE Medical Imaging 2002: Visualization, Image-Guided Procedures, and Display, Seong Mun (Ed.), pp. 242-248, Vol.4681, 2002 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

Towards Patient Specific, Anatomy Based Simulation of Facial Mimics for Surgical Nerve Rehabilitation Computer Assisted Radiology and Surgery (CARS), pp. 3-6, 2002 Stefan Zachow, Evgeny Gladilin, Hans-Christian Hege, Peter Deuflhard BibTeX

Visualisierung von Knochen und Weichteilveränderungen in der Distraktionsosteogenese des Mittelgesichtes Proc. 10. Jahrestagung der Deutschen Gesellschaft für Schädelbasischirurgie, pp. 111-116, 2002 Thomas Hierl, Gert Wollny, Stefan Zachow, Rainer Klöppel BibTeX

2001

3D Osteotomieplanung in der MKG-Chirurgie unter Berücksichtigung der räumlichen Weichgewebeanordnung Rechner- und sensorgestützte Chirurgie, GI Proc. zur SFB 414 Tagung, pp. 217-226, Lecture Notes in Informatics, 2001 Stefan Zachow, Evgeny Gladilin, Hans-Florian Zeilhofer, Robert Sader BibTeX

A Biomechanical Model for Soft Tissue Simulation in Craniofacial Surgery Medical Imaging and Augmented Reality (MIAR), pp. 137-141, 2001 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
DOI

Anisotrope Materialmodellierung für den menschlichen Unterkiefer ZIB-Report 01-31 (Erschienen in: Die Methode der Finiten Elemente in der Biomechanik, Biomedizin und angrenzenden Gebieten, Workshop '01, Univ. Ulm, 23./24.7.2001) Cornelia Kober, Robert Sader, Hans-Florian Zeilhofer, Steffen Prohaska, Stefan Zachow, Peter Deuflhard PDF
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FE-based heuristic approach for the estimation of person-specific facial mimics Proceedings of Euro-Par 2001: 5-th International Symposium on Computer Methods, Biomechanics and Biomedical Engineering, 2001 Evgeny Gladilin, Stefan Zachow, Hans-Christian Hege, Peter Deuflhard BibTeX

Improved 3D Osteotomy Planning in Cranio-Maxillofacial Surgery Proc. Medical Image Computing and Computer-Assisted Intervention (MICCAI 2001), pp. 473-481, Lectures Notes in Computer Science, 2001 Stefan Zachow, Evgeny Gladilin, Hans-Florian Zeilhofer, Robert Sader BibTeX
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Towards a Realistic Simulation of Individual Facial Mimics Vision Modeling and Visualization 2001 (VMV), pp. 129-134, 2001 Evgeny Gladilin, Stefan Zachow, Hans-Christian Hege, Peter Deuflhard BibTeX

Validation of a Linear Elastic Model for Soft Tissue Simulation in Craniofacial Surgery Proc. SPIE Medical Imaging 2001, Seong Mun (Ed.), pp. 27-35, Vol.4319, 2001 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX
DOI

Validierung eines linear elastischen Modells für die Weichgewebesimulation in der Mund-Kiefer-Gesichtschirurgie Bildverarbeitung für die Medizin (BVM), pp. 57-61, 2001 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

Virtual Fibers: A Robust Approach for Muscle Simulation IX Mediterranean Conference on Medical and Biological Engineering and Computing (MEDICON), pp. 961-964, 2001 Evgeny Gladilin, Stefan Zachow, Peter Deuflhard, Hans-Christian Hege BibTeX

2000

Distributed Visualization with OpenGL Vizserver: Practical Experiences ZIB-Report 00-31 Hans-Christian Hege, Andre Merzky, Stefan Zachow PDF
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Finite-Element Simulation of Soft Tissue Deformation Computer Assisted Radiology and Surgey (CARS), pp. 23-28, 2000 Stefan Zachow, Evgeny Gladilin, Hans-Christian Hege, Peter Deuflhard BibTeX

Treatment Planning and Simulation in Craniofacial Surgery with Virtual Reality Techiques Journal of Cranio-Maxillofacial Surgery, Vol.28 (Suppl. 1), p. 82, 2000 Hans-Florian Zeilhofer, Stefan Zachow, Jeffrey Fairley, Robert Sader, Peter Deuflhard BibTeX

1999

A 2D Planning Sytem for Robot-Assisted Interventions Computer Assisted Radiology and Surgery, p. 1049, 1999 Andreas Hein, Tim Lueth, Stefan Zachow, Malte Stien BibTeX

Design and Implementation of a planning system for episthetic surgery Master's thesis, Technische Universität Berlin, Fachbereich Informatik (T.C. Lüth) und ZIB (D. Stalling), Tim Lüth, Detlev Stalling (Advisors), 1999 Stefan Zachow BibTeX

Mehrschichtige Oberflächenmodelle zur computergestützten Planung in der Chirurgie Bildverarbeitung für die Medizin 1999 - Algorithmen, Anwendungen, pp. 203-207, 1999 (preprint available as ZIB-Report TR-98-05) Detlev Stalling, Martin Seebaß, Stefan Zachow PDF (ZIB-Report)
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Optimized Arrangement of Osseointegrated Implants: A Surgical Planning System for the Fixation of Facial Protheses Computer Assisted Radiology and Surgery (CARS’99), pp. 942-946, 1999 Stefan Zachow, Tim Lueth, Detlev Stalling, Andreas Hein, Martin Klein, Horst Menneking BibTeX